RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FTSJ1Q9UET6 329 aa11.13□□□□□ -0.63
RHO-201ENST00000296271 NTNG1Q9Y2I2 539 aa11.13□□□□□ -0.63
RHO-201ENST00000296271 ASB4Q9Y574 426 aa11.13□□□□□ -0.63
RHO-201ENST00000296271 LOC100506127A0A0U1RQW1 187 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 PRR19A6NJB7 356 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 CLCA1A8K7I4 914 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 PLRG1O43660 514 aaKnown RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 OR10H3O60404 316 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 DNTTP04053 509 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 NR2F1P10589 423 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ELAVL4P26378 380 aaKnown RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 OLR1P78380 273 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 AGERQ15109 404 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 OR2L8Q8NGY9 312 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 DYNC2LI1Q8TCX1 351 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ZBED6CLQ96FA7 236 aaPredicted RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 BBS4Q96RK4 519 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 MAPKAP1Q9BPZ7 522 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 SEMA3GQ9NS98 782 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 IMPAD1Q9NX62 359 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 DNAJC27Q9NZQ0 273 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ZNF624Q9P2J8 865 aaPredicted RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 REV1Q9UBZ9 1251 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 GPR55Q9Y2T6 319 aaPredicted RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 PRSS38A1L453 326 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 CDK1P06493 297 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 BMP4P12644 408 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 HOXB2P14652 356 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 HIST1H1TP22492 207 aaPredicted RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 ATP5A1P25705 553 aaKnown RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 KCNJ5P48544 419 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 HMGA2P52926 109 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 RPS3AP61247 264 aaKnown RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 DMPKQ09013 629 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ZIC1Q15915 447 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ZNF542PQ5EBM4 170 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 FRMPD2BQ6IN97 320 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 OR6T1Q8NGN1 323 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 OR9A2Q8NGT5 310 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 SLC35G5Q96KT7 338 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 MCOLN1Q9GZU1 580 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 ZNF556Q9HAH1 456 aa11.12□□□□□ -0.63
RHO-201ENST00000296271 POLMQ9NP87 494 aaPredicted RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.12□□□□□ -0.63
RHO-201ENST00000296271 ZNF860A6NHJ4 632 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 EFCAB9A8MZ26 197 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CLEC3AO75596 197 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 APOL3O95236 402 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ADORA3P0DMS8 318 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CKMT1AP12532 417 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ITGA2P17301 1181 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 TNNI3P19429 210 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 NTSR1P30989 418 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 MC3RP41968 323 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CRISP1P54107 249 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 BTN3A2P78410 334 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ID2Q02363 134 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 TIGD6Q17RP2 521 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 PTCHD4Q6ZW05 846 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CENPSQ8N2Z9 138 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 FLCNQ8NFG4 579 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ZCCHC10Q8TBK6 192 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 POLE4Q9NR33 117 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 TBC1D23Q9NUY8 699 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CLEC2DQ9UHP7 191 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 KCND3Q9UK17 655 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 A4GNTQ9UNA3 340 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 DNMT3AQ9Y6K1 912 aaPredicted RBP11.11□□□□□ -0.63
RHO-201ENST00000296271 CFAP54Q96N23 3096 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 WDR87Q6ZQQ6 2873 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CLDN24A6NM45 220 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 H3BN98 237 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 BOLA2-SMG1P6H3BVE0 249 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ENTPD6O75354 484 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 IFNA14P01570 189 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ASGR2P07307 311 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 BUD31P41223 144 aaPredicted RBP11.11□□□□□ -0.63
RHO-201ENST00000296271 SLC9A5Q14940 896 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 COLEC12Q5KU26 742 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ATAT1Q5SQI0 421 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 PAQR6Q6TCH4 344 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 DCDC5Q6ZRR9 648 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 VN1R4Q7Z5H5 301 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ZNF761Q86XN6 746 aaPredicted RBP11.11□□□□□ -0.63
RHO-201ENST00000296271 STX19Q8N4C7 294 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 ZNF675Q8TD23 568 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 COL26A1Q96A83 441 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 TIMM29Q9BSF4 260 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 PCBD2Q9H0N5 130 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 NEUROD4Q9HD90 331 aa11.11□□□□□ -0.63
RHO-201ENST00000296271 FANCMQ8IYD8 2048 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 ZAR1LA6NP61 321 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 ZIC2O95409 532 aaPredicted RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 DBTP11182 482 aaKnown RBP11.1□□□□□ -0.63
RHO-201ENST00000296271 PVRP15151 417 aa11.1□□□□□ -0.63
RHO-201ENST00000296271 MAGP20916 626 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms