RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SLC35G6P0C7Q6 338 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 EFNA1P20827 205 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-201ENST00000292476 MPLP40238 635 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 EMX1Q04741 257 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-201ENST00000292476 C2orf80Q0P641 193 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 MANEAQ5SRI9 462 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 OR4C11Q6IEV9 310 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 TRIM40Q6P9F5 258 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 FIGLAQ6QHK4 219 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 CCDC80Q76M96 950 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 PRSS48Q7RTY5 328 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 RABEPKQ7Z6M1 372 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 GALNT5Q7Z7M9 940 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 C17orf82Q86X59 251 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-201ENST00000292476 SLC30A8Q8IWU4 369 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 PARP8Q8N3A8 854 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 ARL14Q8N4G2 192 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 OR4A15Q8NGL6 344 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 FLVCR1-AS1Q8TAF5 88 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 CNIH3Q8TBE1 160 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 BARD1Q99728 777 aaKnown RBP15.89■□□□□ 0.13
CPSF4-201ENST00000292476 DPH2Q9BQC3 489 aaPredicted RBP15.89■□□□□ 0.13
CPSF4-201ENST00000292476 TMEM38AQ9H6F2 299 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 DDX31Q9H8H2 851 aaKnown RBP15.89■□□□□ 0.13
CPSF4-201ENST00000292476 BTBD3Q9Y2F9 522 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 PCDHGA10Q9Y5H3 936 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 CFAP54Q96N23 3096 aa15.89■□□□□ 0.13
CPSF4-201ENST00000292476 TNRC6BQ9UPQ9 1833 aaKnown RBP15.88■□□□□ 0.13
CPSF4-201ENST00000292476 PTGES3LE9PB15 166 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 TBX19O60806 448 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 TPP2P29144 1249 aaPredicted RBP15.88■□□□□ 0.13
CPSF4-201ENST00000292476 BSGP35613 385 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 BMXP51813 675 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 TAS2R50P59544 299 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 CTF1Q16619 201 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 FAM71E1Q6IPT2 247 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 ATG16L2Q8NAA4 619 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 OR2L5Q8NG80 312 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 OR52N2Q8NGI0 321 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 OR10Q1Q8NGQ4 319 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 WDR48Q8TAF3 677 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 NT5CQ8TCD5 201 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 FCGR1BQ92637 280 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 PIGKQ92643 395 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 PPCDCQ96CD2 204 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 YIPF6Q96EC8 236 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF764Q96H86 408 aaPredicted RBP15.88■□□□□ 0.13
CPSF4-201ENST00000292476 HRASLS5Q96KN8 279 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 SLC38A3Q99624 504 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 DGCR6LQ9BY27 220 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 MIEF1Q9NQG6 463 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 SEMA4GQ9NTN9 838 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 SH3BP4Q9P0V3 963 aa15.88■□□□□ 0.13
CPSF4-201ENST00000292476 RGS10O43665 173 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 UBXN7O94888 489 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 INMTO95050 263 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 TBX6O95947 436 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-201ENST00000292476 MAGP20916 626 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 TGM1P22735 817 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 SSR2P43308 183 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 RANBP1P43487 201 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 EPHA4P54764 986 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 SELENOWP63302 87 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 NPRL3Q12980 569 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 GAB1Q13480 694 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 NPTX1Q15818 432 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 MLIPQ5VWP3 458 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 ASPGQ86U10 573 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 PLD3Q8IV08 490 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 CAMKVQ8NCB2 501 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 BAHD1Q8TBE0 780 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-201ENST00000292476 RERGQ96A58 199 aaPredicted RBP15.87■□□□□ 0.13
CPSF4-201ENST00000292476 VMP1Q96GC9 406 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 FAIM2Q9BWQ8 316 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 CCDC90BQ9GZT6 254 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 THSD1Q9NS62 852 aa15.87■□□□□ 0.13
CPSF4-201ENST00000292476 DNAAF2Q9NVR5 837 aaKnown RBP15.87■□□□□ 0.13
CPSF4-201ENST00000292476 A0A1B0GVT2 93 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 XPNPEP2O43895 674 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 TNFRSF21O75509 655 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 IFNA14P01570 189 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 FURINP09958 794 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ITGA2P17301 1181 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 ZNF10P21506 573 aaPredicted RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 HOXD12P35452 270 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 CTSKP43235 329 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 CRYBA2P53672 197 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 OCA2Q04671 838 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 AQP6Q13520 282 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 SLC9A5Q14940 896 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 SF3A2Q15428 464 aaKnown RBP15.86■□□□□ 0.13
CPSF4-201ENST00000292476 C14orf28Q4W4Y0 310 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 GCNT6Q5T4J0 391 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 TCEAL6Q6IPX3 200 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 FAM20CQ8IXL6 584 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 S100ZQ8WXG8 99 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 TCEAL3Q969E4 200 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 MS4A6EQ96DS6 147 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 COX4I2Q96KJ9 171 aa15.86■□□□□ 0.13
CPSF4-201ENST00000292476 SIGLEC11Q96RL6 698 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms