RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PDCD10Q9BUL8 212 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GSDMCQ9BYG8 508 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ING3Q9NXR8 418 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 TP53BP1Q12888 1972 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 SH3D21A4FU49 640 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 NCR1O76036 304 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SKP1P63208 163 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GSTM4Q03013 218 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PUM1Q14671 1186 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBR1-201ENST00000290650 SPCS2Q15005 226 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 HTR3DQ70Z44 454 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 BHLHA9Q7RTU4 235 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 KLBQ86Z14 1044 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PACRGLQ8N7B6 248 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SRFBP1Q8NEF9 429 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 ASB11Q8WXH4 323 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 MED20Q9H944 212 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GMEB2Q9UKD1 530 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RGPD3A6NKT7 1758 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 RGPD4Q7Z3J3 1758 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ELOA3DA6NLF2 546 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 ACOT8O14734 319 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SCO2O43819 266 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PEX14O75381 377 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 FHP07954 510 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 IGFBP1P08833 259 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 BMP2P12643 396 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 NFATC3Q12968 1075 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SP140Q13342 867 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ELOA3BQ3SY89 546 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GRHL2Q6ISB3 625 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 VRK2Q86Y07 508 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RAB43Q86YS6 212 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 DCP2Q8IU60 420 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 ELOA3Q8NG57 546 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 FANK1Q8TC84 345 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 AP3S1Q92572 193 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SLCO4A1Q96BD0 722 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ASPNQ9BXN1 380 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RNF167Q9H6Y7 350 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 NMNAT1Q9HAN9 279 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 C8orf4Q9NR00 106 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SNX7Q9UNH6 387 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZNF831Q5JPB2 1677 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PAPPA2Q9BXP8 1791 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 WWP2O00308 870 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZNF26P17031 533 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 SMSP52788 366 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ABATP80404 500 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GXYLT1Q4G148 440 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SOWAHCQ53LP3 525 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZNF613Q6PF04 617 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SHQ1Q6PI26 577 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 ECHDC3Q96DC8 303 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 C16orf58Q96GQ5 468 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GPER1Q99527 375 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RHNO1Q9BSD3 238 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RPRD1BQ9NQG5 326 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 DCAF13Q9NV06 445 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 TEX10Q9NXF1 929 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 HSFX1Q9UBD0 423 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZNF221Q9UK13 617 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 INTS6Q9UL03 887 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 RWDD3Q9Y3V2 267 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 TMEM189-UBE2V1I3L0A0 370 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SLC22A1O15245 554 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 DBIP07108 87 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 GNSP15586 552 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 IMPA1P29218 277 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SDC2P34741 201 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PBX2P40425 430 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 NKX3-2P78367 333 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 CDK3Q00526 305 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PLBD1Q6P4A8 553 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 C12orf40Q86WS4 652 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PELI3Q8N2H9 469 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZNF248Q8NDW4 579 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 OR4K14Q8NGD5 310 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 OR8S1Q8NH09 359 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 ZFP90Q8TF47 636 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 PEX13Q92968 403 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 TMEM80Q96HE8 168 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 GAS2L1Q99501 681 aaPredicted RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 DPH1Q9BZG8 443 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 B3GNT4Q9C0J1 378 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 CLMPQ9H6B4 373 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SEC61A2Q9H9S3 476 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 SRA1Q9HD15 236 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 POU2F3Q9UKI9 436 aa4.55□□□□□ -1.68
UBR1-201ENST00000290650 RPL36Q9Y3U8 105 aaKnown RBP4.55□□□□□ -1.68
UBR1-201ENST00000290650 DOCK8Q8NF50 2099 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 OR6C70A6NIJ9 312 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 PRRT4C9JH25 899 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 SLC2A2P11168 524 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 HOXD8P13378 290 aaPredicted RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 APEHP13798 732 aaKnown RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 P2RY2P41231 377 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 GRK6P43250 576 aa4.54□□□□□ -1.68
UBR1-201ENST00000290650 MAT1AQ00266 395 aaKnown RBP4.54□□□□□ -1.68
UBR1-201ENST00000290650 E2F2Q14209 437 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms