RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MVB12BQ9H7P6 319 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TPT1P8Q9HAU6 139 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 PDE7BQ9NP56 450 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 GPR83Q9NYM4 423 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TAS2R10Q9NYW0 307 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 A0A1B0GTW7 788 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RFPL3O75679 317 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 EGFP01133 1207 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ITGB8P26012 769 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CCR8P51685 355 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 HSPB3Q12988 150 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SP140Q13342 867 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ALG11Q2TAA5 492 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM31Q5JXX7 168 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 BCL2L15Q5TBC7 163 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 C1orf189Q5VU69 101 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ABHD13Q7L211 337 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TMED4Q7Z7H5 227 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 GAL3ST3Q96A11 431 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SNX18Q96RF0 628 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RANBP9Q96S59 729 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CACNG6Q9BXT2 260 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 AGPAT4Q9NRZ5 378 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RNF11Q9Y3C5 154 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 C2orf74A8MZ97 194 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TNFRSF10BO14763 440 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 B3GALT2O43825 422 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CSN2P05814 226 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 EMX1Q04741 257 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 PTGR1Q14914 329 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CYBRD1Q53TN4 286 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SHQ1Q6PI26 577 aaKnown RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RTL4Q6ZR62 310 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CYS1Q717R9 158 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TSEN15Q8WW01 171 aaKnown RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RANGRFQ9HD47 186 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 MGAT4CQ9UBM8 478 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 LTBP1Q14766 1721 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM221A6NGB7 291 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CH25HO95992 272 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF8P17098 575 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CAPN3P20807 821 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 CTSOP43234 321 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 FADDQ13158 208 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 VMACQ2NL98 169 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TECRLQ5HYJ1 363 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 PLEKHS1Q5SXH7 462 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 GALNTL5Q7Z4T8 443 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TSPYL5Q86VY4 417 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SAMD14Q8IZD0 417 aaPredicted RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 HS3ST5Q8IZT8 346 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 GDPD1Q8N9F7 314 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SIMC1Q8NDZ2 872 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 SUN3Q8TAQ9 357 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 PYCR2Q96C36 320 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 TSSK6Q9BXA6 273 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 RHCGQ9UBD6 479 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF639Q9UID6 485 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 HSPE1-MOB4S4R3N1 261 aa10.86□□□□□ -0.67
NPC1L1-201ENST00000289547 A0A1W2PQL4 384 aaPredicted RBP10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 TCRBV3S1A0A5B6 114 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM150CB9EJG8 249 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 ARHGEF15O94989 841 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CRHBPP24387 322 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 HLA-FP30511 346 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 OR1E2P47887 323 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CDH11P55287 796 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 RIPPLY1Q0D2K3 151 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 DUOXA1Q1HG43 343 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 DPPA4Q7L190 304 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SPEM1Q8N4L4 309 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC30A3Q99726 388 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CKLFQ9UBR5 152 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 MMP17Q9ULZ9 603 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 LRRN3E7EW58 273 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 G3V2L1 256 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PRODHO43272 600 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SERPINA3P01011 423 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 H2AFB2P0C5Z0 115 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 RAB3BP20337 219 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PDHA2P29803 388 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CASRP41180 1078 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 BTN3A2P78410 334 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 NR0B2Q15466 257 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 TAF13Q15543 124 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PLXDC1Q8IUK5 500 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC44A3Q8N4M1 653 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 HCAR2Q8TDS4 363 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC9A6Q92581 669 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 DHRS4Q9BTZ2 278 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CENPOQ9BU64 300 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 C20orf27Q9GZN8 174 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CST11Q9H112 138 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 OR51E2Q9H255 320 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 LRRN3Q9H3W5 708 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 ZFR2Q9UPR6 939 aaKnown RBP10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 MAGED1Q9Y5V3 778 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms