RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SERPINB5P36952 375 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ST13P50502 369 aaKnown RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CLCN2P51788 898 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 TDGF1P3P51864 188 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 RAP1GDS1P52306 607 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SLC37A1P57057 533 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 RNF4P78317 190 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 PHEXP78562 749 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 MPEG1Q2M385 716 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 PRICKLE4Q2TBC4 344 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 XKR7Q5GH72 579 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 PIGGQ5H8A4 983 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CEP85LQ5SZL2 805 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CCNYL2Q5T2Q4 361 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ABHD17BQ5VST6 288 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 TTC19Q6DKK2 380 aaPredicted RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CLEC6AQ6EIG7 209 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SPINK14Q6IE38 97 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 FAM71E1Q6IPT2 247 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ZCCHC23Q6ZST2 131 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 PAGE2Q7Z2X7 111 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CHERPQ8IWX8 916 aaKnown RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 C9orf40Q8IXQ3 194 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 GALNT11Q8NCW6 608 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SIMC1Q8NDZ2 872 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SUN3Q8TAQ9 357 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 FAM76AQ8TAV0 307 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CPT1CQ8TCG5 803 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 C16orf78Q8WTQ4 265 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 DAZLQ92904 295 aaKnown RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 ADIPOR1Q96A54 375 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 C3orf30Q96M34 536 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SMC6Q96SB8 1091 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SORT1Q99523 831 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SLX1AQ9BQ83 275 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 CENPKQ9BS16 269 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 TRIM4Q9C037 500 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 EPS8L2Q9H6S3 715 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 PROK2Q9HC23 129 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 PNO1Q9NRX1 252 aaKnown RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 LUZP4Q9P127 313 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 G3BP2Q9UN86 482 aaKnown RBP8.5□□□□□ -1.05
HMGN1-201ENST00000288344 TRAF6Q9Y4K3 522 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 DOPEY1Q5JWR5 2465 aa8.5□□□□□ -1.05
HMGN1-201ENST00000288344 SPTAN1Q13813 2472 aaKnown RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 NUP214P35658 2090 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 TRAV17A0A0B4J275 112 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 WIPF3A6NGB9 483 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 GABRR3A8MPY1 467 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 TMEM233B4DJY2 109 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 AZIN1O14977 448 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 LSM1O15116 133 aaKnown RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 TM9SF1O15321 606 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 RGS16O15492 202 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 PRAMEF2O60811 474 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 RSL1D1O76021 490 aaKnown RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 ZFAND5O76080 213 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 F10P00742 488 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 ATP1B1P05026 303 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 THBS1P07996 1170 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 CPMP14384 443 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 DRD2P14416 443 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 MST1P26927 711 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 TLX1P31314 330 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 TIA1P31483 386 aaKnown RBP eCLIP8.49□□□□□ -1.052e-6■■□□□ 12.1
HMGN1-201ENST00000288344 BUD31P41223 144 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 HLCSP50747 726 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 XKP51811 444 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 HK2P52789 917 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 MAPK12P53778 367 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 STX4Q12846 297 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 CASP8Q14790 479 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF791Q3KP31 576 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 RFTN2Q52LD8 501 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 SPIN4Q56A73 249 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 OR52E8Q6IFG1 317 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 CYP20A1Q6UW02 462 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 MDGA2Q7Z553 956 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 SIAH3Q8IW03 269 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 CLYBLQ8N0X4 340 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 SLC5A8Q8N695 610 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 OR4K14Q8NGD5 310 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 NUBPLQ8TB37 319 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 GRHL3Q8TE85 626 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 DOK4Q8TEW6 326 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 FAR1Q8WVX9 515 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 RBM18Q96H35 190 aaKnown RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 EGLN2Q96KS0 407 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 SH3GL2Q99962 352 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 SHCBP1LQ9BZQ2 653 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 LIN28AQ9H9Z2 209 aaKnown RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 NMRK1Q9NWW6 199 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 EHD3Q9NZN3 535 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 MID2Q9UJV3 735 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 DLGAP4Q9Y2H0 992 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 WBP11Q9Y2W2 641 aaKnown RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 YARS2Q9Y2Z4 477 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms