RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ZNF10P21506 573 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 IST1P53990 364 aa2.57□□□□□ -2
CHD1-201ENST00000284049 HNRNPH2P55795 449 aaKnown RBP2.57□□□□□ -2
CHD1-201ENST00000284049 BST1Q10588 318 aa2.57□□□□□ -2
CHD1-201ENST00000284049 NFYCQ13952 458 aa2.57□□□□□ -2
CHD1-201ENST00000284049 LIPJQ5W064 366 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SPECC1LQ69YQ0 1117 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SLC27A4Q6P1M0 643 aa2.57□□□□□ -2
CHD1-201ENST00000284049 Q6ZRG5 221 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ZNF534Q76KX8 674 aa2.57□□□□□ -2
CHD1-201ENST00000284049 FJX1Q86VR8 437 aa2.57□□□□□ -2
CHD1-201ENST00000284049 CRYBG2Q8N1P7 616 aa2.57□□□□□ -2
CHD1-201ENST00000284049 OR1L4Q8NGR5 311 aa2.57□□□□□ -2
CHD1-201ENST00000284049 RAET1EQ8TD07 263 aa2.57□□□□□ -2
CHD1-201ENST00000284049 SCARB1Q8WTV0 552 aa2.57□□□□□ -2
CHD1-201ENST00000284049 C12orf66Q96MD2 445 aa2.57□□□□□ -2
CHD1-201ENST00000284049 GLT1D1Q96MS3 346 aa2.57□□□□□ -2
CHD1-201ENST00000284049 VSTM2LQ96N03 204 aa2.57□□□□□ -2
CHD1-201ENST00000284049 NEU1Q99519 415 aa2.57□□□□□ -2
CHD1-201ENST00000284049 LMAN1LQ9HAT1 526 aa2.57□□□□□ -2
CHD1-201ENST00000284049 DMAP1Q9NPF5 467 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 MKKSQ9NPJ1 570 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 C20orf96Q9NUD7 363 aaPredicted RBP2.57□□□□□ -2
CHD1-201ENST00000284049 CA5BQ9Y2D0 317 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ZBED9Q6R2W3 1325 aa2.57□□□□□ -2
CHD1-201ENST00000284049 ZNF716A6NP11 495 aa2.56□□□□□ -2
CHD1-201ENST00000284049 DVL1O14640 695 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PPP1R2P9O14990 202 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PLSCR1O15162 318 aa2.56□□□□□ -2
CHD1-201ENST00000284049 KIAA0513O60268 411 aa2.56□□□□□ -2
CHD1-201ENST00000284049 VNN2O95498 520 aa2.56□□□□□ -2
CHD1-201ENST00000284049 IGHV2-70P01814 119 aa2.56□□□□□ -2
CHD1-201ENST00000284049 ZNF735P0CB33 412 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CTSAP10619 480 aa2.56□□□□□ -2
CHD1-201ENST00000284049 HAPLN1P10915 354 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 ALDH1B1P30837 517 aa2.56□□□□□ -2
CHD1-201ENST00000284049 OR3A3P47888 321 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CCR4P51679 360 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CLCNKAP51800 687 aa2.56□□□□□ -2
CHD1-201ENST00000284049 DVL1P1P54792 670 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 CSTF1Q05048 431 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 TOB2Q14106 344 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 HERC3Q15034 1050 aa2.56□□□□□ -2
CHD1-201ENST00000284049 ZNF829Q3KNS6 432 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 RNASE12Q5GAN4 147 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 SLC27A1Q6PCB7 646 aa2.56□□□□□ -2
CHD1-201ENST00000284049 FAM198BQ6UWH4 519 aa2.56□□□□□ -2
CHD1-201ENST00000284049 FAM159AQ6UWV7 190 aa2.56□□□□□ -2
CHD1-201ENST00000284049 DBX2Q6ZNG2 339 aa2.56□□□□□ -2
CHD1-201ENST00000284049 SSX9Q7RTT3 188 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CCDC60Q8IWA6 550 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 OFCC1Q8IZS5 231 aa2.56□□□□□ -2
CHD1-201ENST00000284049 RAB42Q8N4Z0 105 aa2.56□□□□□ -2
CHD1-201ENST00000284049 SLC38A5Q8WUX1 472 aa2.56□□□□□ -2
CHD1-201ENST00000284049 MUS81Q96NY9 551 aa2.56□□□□□ -2
CHD1-201ENST00000284049 TSSK2Q96PF2 358 aa2.56□□□□□ -2
CHD1-201ENST00000284049 MTMR9Q96QG7 549 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PIGQQ9BRB3 760 aa2.56□□□□□ -2
CHD1-201ENST00000284049 TEX101Q9BY14 249 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PCDH9Q9HC56 1237 aa2.56□□□□□ -2
CHD1-201ENST00000284049 TXNRD2Q9NNW7 524 aa2.56□□□□□ -2
CHD1-201ENST00000284049 TREM1Q9NP99 234 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PTGFRNQ9P2B2 879 aa2.56□□□□□ -2
CHD1-201ENST00000284049 EXOGQ9Y2C4 368 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 C15orf41Q9Y2V0 281 aa2.56□□□□□ -2
CHD1-201ENST00000284049 NME7Q9Y5B8 376 aa2.56□□□□□ -2
CHD1-201ENST00000284049 NPIPA5A0A0B4J1W7 369 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CBY3A6NI87 242 aa2.56□□□□□ -2
CHD1-201ENST00000284049 LRRC3CA6NJW4 275 aa2.56□□□□□ -2
CHD1-201ENST00000284049 NPIPA5E9PKD4 350 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PRRG2O14669 202 aa2.56□□□□□ -2
CHD1-201ENST00000284049 SORBS2O94875 1100 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 DIRAS1O95057 198 aa2.56□□□□□ -2
CHD1-201ENST00000284049 TGM6O95932 706 aa2.56□□□□□ -2
CHD1-201ENST00000284049 SKILP12757 684 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CYP2B6P20813 491 aa2.56□□□□□ -2
CHD1-201ENST00000284049 HOXA7P31268 230 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 EIF3EP60228 445 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 HERVK_113P63132 956 aa2.56□□□□□ -2
CHD1-201ENST00000284049 ERVK-8P63133 956 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CALCOCO2Q13137 446 aa2.56□□□□□ -2
CHD1-201ENST00000284049 HNRNPDQ14103 355 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 RHBDD2Q6NTF9 364 aa2.56□□□□□ -2
CHD1-201ENST00000284049 Q6ZNX1 250 aa2.56□□□□□ -2
CHD1-201ENST00000284049 DNAJC22Q8N4W6 341 aa2.56□□□□□ -2
CHD1-201ENST00000284049 FAM98AQ8NCA5 519 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 DMBX1Q8NFW5 382 aa2.56□□□□□ -2
CHD1-201ENST00000284049 BBS10Q8TAM1 723 aa2.56□□□□□ -2
CHD1-201ENST00000284049 M1APQ8TC57 530 aa2.56□□□□□ -2
CHD1-201ENST00000284049 SLC25A43Q8WUT9 341 aaPredicted RBP2.56□□□□□ -2
CHD1-201ENST00000284049 MITD1Q8WV92 249 aa2.56□□□□□ -2
CHD1-201ENST00000284049 TSEN15Q8WW01 171 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 IFT81Q8WYA0 676 aa2.56□□□□□ -2
CHD1-201ENST00000284049 HAS1Q92839 578 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CXorf40BQ96DE9 158 aa2.56□□□□□ -2
CHD1-201ENST00000284049 SCRN2Q96FV2 425 aa2.56□□□□□ -2
CHD1-201ENST00000284049 PIWIL1Q96J94 861 aaKnown RBP2.56□□□□□ -2
CHD1-201ENST00000284049 PLEKHG4BQ96PX9 1271 aa2.56□□□□□ -2
CHD1-201ENST00000284049 HAUS8Q9BT25 410 aa2.56□□□□□ -2
CHD1-201ENST00000284049 CHRDL1Q9BU40 450 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms