RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SNPHO15079 494 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 KIAA0513O60268 411 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 MMP20O60882 483 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 SLITRK5O94991 958 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 RECKO95980 971 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 ADH1CP00326 375 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 APOA1P02647 267 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 GBAP04062 536 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 HSMCR30P0CW71 290 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 KELP23276 732 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 CSTF2P33240 577 aaKnown RBP eCLIP12.24□□□□□ -0.45
C9orf3-201ENST00000277198 CNR2P34972 360 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 ST8SIA6P61647 398 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 SELENBP1Q13228 472 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 PUM1Q14671 1186 aaKnown RBP eCLIP12.24□□□□□ -0.45
C9orf3-201ENST00000277198 MED22Q15528 200 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 DUSP7Q16829 419 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 C2orf27AQ580R0 203 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 PRAMEF14Q5SWL7 426 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 PRAMEF13Q5VWM6 474 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 SLX4IPQ5VYV7 408 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 TRMT11Q7Z4G4 463 aaKnown RBP12.24□□□□□ -0.45
C9orf3-201ENST00000277198 AKAP14Q86UN6 197 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 TRAPPC5Q8IUR0 188 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 CYP4Z2PQ8N1L4 340 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 OR5AK3PQ8NH89 298 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 ERLEC1Q96DZ1 483 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 NUAK2Q9H093 628 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 MOV10Q9HCE1 1003 aaKnown RBP12.24□□□□□ -0.45
C9orf3-201ENST00000277198 DYRK4Q9NR20 520 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 POLE4Q9NR33 117 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 ACAD8Q9UKU7 415 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 HCN2Q9UL51 889 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 RPL36Q9Y3U8 105 aaKnown RBP12.24□□□□□ -0.45
C9orf3-201ENST00000277198 ZNF292O60281 2723 aa12.24□□□□□ -0.45
C9orf3-201ENST00000277198 SDK1Q7Z5N4 2213 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 PROB1E7EW31 1015 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 TLR4O00206 839 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SAP18O00422 153 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 MFN2O95140 757 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 DLGAP3O95886 979 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 DRD1P21728 446 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 FRKP42685 505 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 DGKGP49619 791 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 CASP9P55211 416 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 COPZ1P61923 177 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ALDH6A1Q02252 535 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 CNTN1Q12860 1018 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 LPAL2Q16609 132 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SLC25A30Q5SVS4 291 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 DCST1Q5T197 706 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 VN1R5Q7Z5H4 357 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 LINC00471Q8N535 108 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 TMIEQ8NEW7 156 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SLC38A5Q8WUX1 472 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 KLHL6Q8WZ60 621 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 PCBD2Q9H0N5 130 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 IRF2BPLQ9H1B7 796 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 OR2AG1Q9H205 316 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 CXorf36Q9H7Y0 433 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 PELI2Q9HAT8 420 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 REV1Q9UBZ9 1251 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 DCHS1Q96JQ0 3298 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 FFAR1O14842 300 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 HOXC11O43248 304 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ASNA1O43681 348 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 POP7O75817 140 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 KAT7O95251 611 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ERGP11308 486 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 POU2F1P14859 743 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ITGB7P26010 798 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 GPR1P46091 355 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 TPTEP56180 551 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 COX10Q12887 443 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 TSTA3Q13630 321 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 GANABQ14697 944 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 MLC1Q15049 377 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 OCLNQ16625 522 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 TSTQ16762 297 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 PRSS53Q2L4Q9 553 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 KHDRBS2Q5VWX1 349 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 C12orf73Q69YU5 71 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 PRR23CQ6ZRP0 262 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 HEATR4Q86WZ0 1026 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ZBTB44Q8NCP5 570 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 WDR36Q8NI36 951 aaKnown RBP12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SORCS1Q8WY21 1168 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 NUS1Q96E22 293 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 TMEM80Q96HE8 168 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ZNF354BQ96LW1 612 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 OR5M11Q96RB7 305 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ZNF607Q96SK3 696 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SLC30A2Q9BRI3 323 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 ZDHHC5Q9C0B5 715 aa12.23□□□□□ -0.45
C9orf3-201ENST00000277198 SPNS1Q9H2V7 528 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms