RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 B4DXG7 233 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 CCDC188H7C350 402 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 K7EPI3 171 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PGRMC2O15173 223 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 AIFM1O95831 613 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 GBAP04062 536 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 ALOX15P16050 662 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 PTGDSP41222 190 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PIK3CGP48736 1102 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 NEK2P51955 445 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 FBXW4P57775 412 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 GUCY2DQ02846 1103 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 FOXD4Q12950 439 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 LAPTM5Q13571 262 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 DDX39BQ13838 428 aaKnown RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 RCN2Q14257 317 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 ZNF267Q14586 743 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 CEBPEQ15744 281 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 AP5B1Q2VPB7 878 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 SLC25A35Q3KQZ1 300 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PAGE2BQ5JRK9 111 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 WLSQ5T9L3 541 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 CES4AQ5XG92 561 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 SLC22A10Q63ZE4 541 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PLXDC2Q6UX71 529 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 GPR180Q86V85 440 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 TGIF2LYQ8IUE0 185 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 ST13P4Q8IZP2 240 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 SIMC1Q8NDZ2 872 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 WDR20Q8TBZ3 569 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PYROXD1Q8WU10 500 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 KCTD4Q8WVF5 259 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 ADIPOR1Q96A54 375 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 SARAFQ96BY9 339 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 CMTM7Q96FZ5 175 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 GAL3ST4Q96RP7 486 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PHACTR1Q9C0D0 580 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 ROGDIQ9GZN7 287 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 LDAHQ9H6V9 325 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 DDX31Q9H8H2 851 aaKnown RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 TEX10Q9NXF1 929 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 ALKBH4Q9NXW9 302 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 COPS7AQ9UBW8 275 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PYCARDQ9ULZ3 195 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 PLEKHA6Q9Y2H5 1048 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 RPH3AQ9Y2J0 694 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 TSC22D4Q9Y3Q8 395 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 SAR1BQ9Y6B6 198 aa8.2□□□□□ -1.1
TPM3-201ENST00000271850 NSD1Q96L73 2696 aaPredicted RBP8.2□□□□□ -1.1
TPM3-201ENST00000271850 A6NNC1 897 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SUPT3HB4E1H0 165 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 H0YIV9 168 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SYT5O00445 386 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 ZSCAN12O43309 604 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SUPT3HO75486 399 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 ZWINTO95229 277 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SIX3O95343 332 aaPredicted RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 GPR75O95800 540 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 CD99P14209 185 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 S1PR1P21453 382 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 HPDP32754 393 aaPredicted RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 PIK3CBP42338 1070 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SLCO1A2P46721 670 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 RNF144AP50876 292 aaPredicted RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 AGFG1P52594 562 aaKnown RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 SLC12A2P55011 1212 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 GNG11P61952 73 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 KCNJ2P63252 427 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 PLIN5Q00G26 463 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 DUSP2Q05923 314 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 TGM3Q08188 693 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 C2orf54Q08AI8 447 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 MGAT2Q10469 447 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SLMAPQ14BN4 828 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SETDB1Q15047 1291 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 HIST2H2ACQ16777 129 aaPredicted RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 FBXL19-AS1Q494R0 122 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 EIPR1Q53HC9 387 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 HIST2H2AA3Q6FI13 130 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 C3orf62Q6ZUJ4 267 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 CHSY3Q70JA7 882 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 CDC20BQ86Y33 519 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 CLYBLQ8N0X4 340 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 MMP21Q8N119 569 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SLC15A4Q8N697 577 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 TEX9Q8N6V9 391 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 ZNF615Q8N8J6 731 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SRFBP1Q8NEF9 429 aaKnown RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 STAG3L4Q8TBR4 150 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SLC22A8Q8TCC7 542 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 FBXO25Q8TCJ0 367 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 SPPL2AQ8TCT8 520 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 TANKQ92844 425 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 NINJ1Q92982 152 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 GTPBP3Q969Y2 492 aaKnown RBP8.19□□□□□ -1.1
TPM3-201ENST00000271850 TSPAN17Q96FV3 270 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 DOCK7Q96N67 2140 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 TIMP4Q99727 224 aa8.19□□□□□ -1.1
TPM3-201ENST00000271850 NAPGQ99747 312 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms