RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ELOVL7A1L3X0 281 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 OR2B3O76000 313 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 GPIP06744 558 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 RGS1Q08116 209 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 TGM3Q08188 693 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 WLSQ5T9L3 541 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 TRIM40Q6P9F5 258 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF793Q6ZN11 406 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 SERPINA11Q86U17 422 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 TICAM1Q8IUC6 712 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF843Q8N446 348 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 DTWD1Q8N5C7 304 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 FAM120BQ96EK7 910 aaKnown RBP23.14■■□□□ 1.3
SSBP4-201ENST00000270061 TACO1Q9BSH4 297 aaKnown RBP23.14■■□□□ 1.3
SSBP4-201ENST00000270061 VPS4AQ9UN37 437 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 C15orf41Q9Y2V0 281 aa23.14■■□□□ 1.3
SSBP4-201ENST00000270061 ZNF749O43361 778 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 ERI3O43414 337 aaKnown RBP23.14■■□□□ 1.29
SSBP4-201ENST00000270061 HCRTR1O43613 425 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 CREG1O75629 220 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 HBQ1P09105 142 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 DRD2P14416 443 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 HIST1H1TP22492 207 aaPredicted RBP23.14■■□□□ 1.29
SSBP4-201ENST00000270061 GABRA4P48169 554 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 RPS15P62841 145 aaKnown RBP23.14■■□□□ 1.29
SSBP4-201ENST00000270061 ERV3-1Q14264 604 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 ATP1A1-AS1Q5TC04 95 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 MRM1Q6IN84 353 aaKnown RBP23.14■■□□□ 1.29
SSBP4-201ENST00000270061 MICU2Q8IYU8 434 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 CANT1Q8WVQ1 401 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 REXO5Q96IC2 774 aaKnown RBP23.14■■□□□ 1.29
SSBP4-201ENST00000270061 TAS2R7Q9NYW3 318 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 RIMS3Q9UJD0 308 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 PCDHGB4Q9UN71 923 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 CORO2BQ9UQ03 480 aa23.14■■□□□ 1.29
SSBP4-201ENST00000270061 DHRS12A0PJE2 317 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 CTSVO60911 334 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 GMNNO75496 209 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 SCELO95171 688 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 NCK1P16333 377 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 RORAP35398 523 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 SLC9A5Q14940 896 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 PRSS53Q2L4Q9 553 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 DNAJC22Q8N4W6 341 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 AMER3Q8N944 861 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 OR4A15Q8NGL6 344 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 GAL3ST3Q96A11 431 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 NSMCE2Q96MF7 247 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 CHST8Q9H2A9 424 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 RPF2Q9H7B2 306 aaKnown RBP23.13■■□□□ 1.29
SSBP4-201ENST00000270061 TPT1P8Q9HAU6 139 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 EHD3Q9NZN3 535 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 PLCL2Q9UPR0 1127 aa23.13■■□□□ 1.29
SSBP4-201ENST00000270061 C4orf51C9J302 202 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 GUCY1B2O75343 617 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 FAM58BPP0C7Q3 252 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 SFTPCP11686 197 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ATP5A1P25705 553 aaKnown RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 POLE2P56282 527 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 DEFB109BQ30KR1 87 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 LILRA2Q8N149 483 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ACOT4Q8N9L9 421 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ZFP90Q8TF47 636 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ZFYVE21Q9BQ24 234 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 MACROD1Q9BQ69 325 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 VCX3BQ9H321 246 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 IRAK4Q9NWZ3 460 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 H3BMH7 237 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 RECKO95980 971 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ABCB1P08183 1280 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 SLC35G6P0C7Q6 338 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 PSMA4P25789 261 aaKnown RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 FRKP42685 505 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 HBA1P69905 142 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 RNF44Q7L0R7 432 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ADGRG5Q8IZF4 528 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 MMP21Q8N119 569 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 CIDECQ96AQ7 238 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 DPH2Q9BQC3 489 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 FAIM2Q9BWQ8 316 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 SPATA9Q9BWV2 254 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 SPRTNQ9H040 489 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 COPS7BQ9H9Q2 264 aaPredicted RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 FARSAQ9Y285 508 aaKnown RBP23.12■■□□□ 1.29
SSBP4-201ENST00000270061 ASB4Q9Y574 426 aa23.12■■□□□ 1.29
SSBP4-201ENST00000270061 A0A1W2PRB8 838 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 ZSCAN9O15535 394 aaPredicted RBP23.11■■□□□ 1.29
SSBP4-201ENST00000270061 PEX1O43933 1283 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 C6orf47O95873 294 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 SMIM10L1P0DMW3 83 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 EFNA1P20827 205 aaPredicted RBP23.11■■□□□ 1.29
SSBP4-201ENST00000270061 IL10P22301 178 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 TLDC1Q6P9B6 456 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 ZNF551Q7Z340 670 aaPredicted RBP23.11■■□□□ 1.29
SSBP4-201ENST00000270061 C10orf111Q8N326 155 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 TRIML2Q8N7C3 387 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 TMEM102Q8N9M5 508 aaPredicted RBP23.11■■□□□ 1.29
SSBP4-201ENST00000270061 CAMKVQ8NCB2 501 aa23.11■■□□□ 1.29
SSBP4-201ENST00000270061 PAPD5Q8NDF8 572 aaKnown RBP23.11■■□□□ 1.29
SSBP4-201ENST00000270061 POP5Q969H6 163 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms