RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TRIM69Q86WT6 500 aa16.01■□□□□ 0.15
RTN1-201ENST00000267484 DCLRE1CQ96SD1 692 aaKnown RBP16.01■□□□□ 0.15
RTN1-201ENST00000267484 EGLN3Q9H6Z9 239 aa16.01■□□□□ 0.15
RTN1-201ENST00000267484 HCN2Q9UL51 889 aa16.01■□□□□ 0.15
RTN1-201ENST00000267484 MGAT4BQ9UQ53 548 aa16.01■□□□□ 0.15
RTN1-201ENST00000267484 HMX3A6NHT5 357 aa16■□□□□ 0.15
RTN1-201ENST00000267484 PLA2G10O15496 165 aa16■□□□□ 0.15
RTN1-201ENST00000267484 PRKRAO75569 313 aaKnown RBP16■□□□□ 0.15
RTN1-201ENST00000267484 EPHX1P07099 455 aa16■□□□□ 0.15
RTN1-201ENST00000267484 ENDOUP21128 410 aaKnown RBP16■□□□□ 0.15
RTN1-201ENST00000267484 MYL9P24844 172 aa16■□□□□ 0.15
RTN1-201ENST00000267484 PSMB5P28074 263 aa16■□□□□ 0.15
RTN1-201ENST00000267484 SOX18P35713 384 aa16■□□□□ 0.15
RTN1-201ENST00000267484 KHDRBS1Q07666 443 aaKnown RBP eCLIP16■□□□□ 0.15
RTN1-201ENST00000267484 PCDH1Q08174 1060 aa16■□□□□ 0.15
RTN1-201ENST00000267484 MLLT11Q13015 90 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 E2F2Q14209 437 aa16■□□□□ 0.15
RTN1-201ENST00000267484 CRTC2Q53ET0 693 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 MEDAGQ5VYS4 303 aa16■□□□□ 0.15
RTN1-201ENST00000267484 SLC9B2Q86UD5 537 aa16■□□□□ 0.15
RTN1-201ENST00000267484 PDZD3Q86UT5 571 aa16■□□□□ 0.15
RTN1-201ENST00000267484 OR5AR1Q8NGP9 310 aa16■□□□□ 0.15
RTN1-201ENST00000267484 OR52P1PQ8NH57 321 aa16■□□□□ 0.15
RTN1-201ENST00000267484 SLC22A4Q9H015 551 aa16■□□□□ 0.15
RTN1-201ENST00000267484 QRSL1Q9H0R6 528 aaKnown RBP16■□□□□ 0.15
RTN1-201ENST00000267484 CUEDC1Q9NWM3 386 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 NDRG2Q9UN36 371 aaKnown RBP16■□□□□ 0.15
RTN1-201ENST00000267484 SNX7Q9UNH6 387 aa16■□□□□ 0.15
RTN1-201ENST00000267484 IRS1P35568 1242 aa16■□□□□ 0.15
RTN1-201ENST00000267484 PNLIPRP1P54315 467 aa16■□□□□ 0.15
RTN1-201ENST00000267484 SAXO2Q658L1 398 aa16■□□□□ 0.15
RTN1-201ENST00000267484 CCDC149Q6ZUS6 474 aa16■□□□□ 0.15
RTN1-201ENST00000267484 LRRC56Q8IYG6 542 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 RNF170Q96K19 258 aa16■□□□□ 0.15
RTN1-201ENST00000267484 TREX2Q9BQ50 279 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 TRPC4Q9UBN4 977 aa16■□□□□ 0.15
RTN1-201ENST00000267484 XIRP2A4UGR9 3374 aa16■□□□□ 0.15
RTN1-201ENST00000267484 ARRDC5A6NEK1 342 aa16■□□□□ 0.15
RTN1-201ENST00000267484 ITGB7P26010 798 aa16■□□□□ 0.15
RTN1-201ENST00000267484 PRKAG1P54619 331 aa16■□□□□ 0.15
RTN1-201ENST00000267484 MLLT1Q03111 559 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16■□□□□ 0.15
RTN1-201ENST00000267484 GPAT3Q53EU6 434 aa16■□□□□ 0.15
RTN1-201ENST00000267484 TMEM201Q5SNT2 666 aa16■□□□□ 0.15
RTN1-201ENST00000267484 TYW3Q6IPR3 259 aaKnown RBP16■□□□□ 0.15
RTN1-201ENST00000267484 FAM83HQ6ZRV2 1179 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 KLHDC8AQ8IYD2 350 aa16■□□□□ 0.15
RTN1-201ENST00000267484 NEURL3Q96EH8 262 aa16■□□□□ 0.15
RTN1-201ENST00000267484 ZNF582Q96NG8 517 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 TEX10Q9NXF1 929 aaPredicted RBP16■□□□□ 0.15
RTN1-201ENST00000267484 A4GNTQ9UNA3 340 aa16■□□□□ 0.15
RTN1-201ENST00000267484 CLCA3PQ9Y6N3 262 aa16■□□□□ 0.15
RTN1-201ENST00000267484 IQCMA0A1B0GVH7 501 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 GLOD5A6NK44 160 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 FAAHO00519 579 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SRPRAP08240 638 aaKnown RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 POLR2EP19388 210 aaKnown RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 SNAPC1Q16533 368 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 PARS2Q7L3T8 475 aaKnown RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 OR4K5Q8NGD3 323 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SLC9A6Q92581 669 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 TM4SF18Q96CE8 201 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SIRT3Q9NTG7 399 aaPredicted RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 TAC3Q9UHF0 121 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 ASF1AQ9Y294 204 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 WNT6Q9Y6F9 365 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 PDPK1O15530 556 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 FRS3O43559 492 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SCO2O43819 266 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 RPL3P39023 403 aaKnown RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 KCNJ5P48544 419 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 MAN2A2P49641 1150 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 P2RY14Q15391 338 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 CLEC12AQ5QGZ9 265 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 LYPD8Q6UX82 237 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 NOXA1Q86UR1 476 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 ZNF547Q8IVP9 402 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 ANKRD53Q8N9V6 530 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 WDFY2Q96P53 400 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 KATNB1Q9BVA0 655 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 ZNF717Q9BY31 904 aaPredicted RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 SMLR1H3BR10 107 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SOD1P00441 154 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SERPIND1P05546 499 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 C8AP07357 584 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 SYN1P17600 705 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 PRAMEF14Q5SWL7 426 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 PRAMEF13Q5VWM6 474 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 LHFPL3Q86UP9 236 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 DTX3Q8N9I9 347 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 NLGN4YQ8NFZ3 816 aaPredicted RBP15.99■□□□□ 0.15
RTN1-201ENST00000267484 ZNF354BQ96LW1 612 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 IL36AQ9UHA7 158 aa15.99■□□□□ 0.15
RTN1-201ENST00000267484 OR6C70A6NIJ9 312 aa15.98■□□□□ 0.15
RTN1-201ENST00000267484 CPNE3O75131 537 aaKnown RBP15.98■□□□□ 0.15
RTN1-201ENST00000267484 CH25HO95992 272 aa15.98■□□□□ 0.15
RTN1-201ENST00000267484 PRKCAP17252 672 aa15.98■□□□□ 0.15
RTN1-201ENST00000267484 DDCP20711 480 aa15.98■□□□□ 0.15
RTN1-201ENST00000267484 MMP12P39900 470 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms