RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MYO15AQ9UKN7 3530 aa21.48■■□□□ 1.03
SMARCB1-201ENST00000263121 HMGN4O00479 90 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 GCM2O75603 506 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 TIPRLO75663 272 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 ZNF628Q5EBL2 1059 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 ERMP1Q7Z2K6 904 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 SZRD1Q7Z422 152 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 OR7G2Q8NG99 324 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 NFKBIDQ8NI38 313 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 MIPOL1Q8TD10 442 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 SEPHS2Q99611 448 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 UGT2B28Q9BY64 529 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 FTSJ1Q9UET6 329 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 CDC14AQ9UNH5 594 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 UPK1AO00322 258 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 CTNSO60931 367 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 PRKD3O94806 890 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 IFI6P09912 130 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 CD59P13987 128 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 IGLV3-21P80748 117 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 CDK6Q00534 326 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 FAM98BQ52LJ0 330 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 LRRC23Q53EV4 343 aaPredicted RBP21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 MED25Q71SY5 747 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 SLC30A8Q8IWU4 369 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 NUP43Q8NFH3 380 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 OR51I1Q9H343 314 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 PTGFRNQ9P2B2 879 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 NDOR1Q9UHB4 597 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 SAMD4AQ9UPU9 718 aaKnown RBP21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 MAU2Q9Y6X3 613 aa21.47■■□□□ 1.03
SMARCB1-201ENST00000263121 RALGAPA1Q6GYQ0 2036 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 SLITRK5O94991 958 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 HMGN2P05204 90 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 SLC35E2P0CK97 266 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 RAP2AP10114 183 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 MATN1P21941 496 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 ALAS2P22557 587 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 XCR1P46094 333 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 KHKP50053 298 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 CRYBA2P53672 197 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 PRKAG1P54619 331 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 MRPS35P82673 323 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 TRA2AQ13595 282 aaKnown RBP eCLIP21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 DSG2Q14126 1118 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 TRIP10Q15642 601 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 NKG7Q16617 165 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 FHL5Q5TD97 284 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 HMBOX1Q6NT76 420 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 CCDC80Q76M96 950 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 GALNT10Q86SR1 603 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 OR2L13Q8N349 312 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 ZNF675Q8TD23 568 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 GIMAP5Q96F15 307 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 OR6C1Q96RD1 312 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 MAGIXQ9H6Y5 334 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 ANKRA2Q9H9E1 313 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 PRTFDC1Q9NRG1 225 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 THUMPD1Q9NXG2 353 aaKnown RBP21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 CLDN16Q9Y5I7 305 aa21.46■■□□□ 1.03
SMARCB1-201ENST00000263121 SCN2AQ99250 2005 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 MYOCOSA0A1B0GUC4 107 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 A0A1B0GX78 115 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 TGFBR3LH3BV60 316 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 CLDN4O14493 209 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 HYAL3O43820 417 aaPredicted RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 CAPNS1P04632 268 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 PEX2P28328 305 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 OR1D4P47884 311 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 CHRNB3Q05901 458 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 ZFP36L1Q07352 338 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 ERV3-1Q14264 604 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 MYBPC3Q14896 1274 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 PRICKLE4Q2TBC4 344 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 PHF19Q5T6S3 580 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 INTS11Q5TA45 600 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 OGFRL1Q5TC84 451 aaPredicted RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 FAM111BQ6SJ93 734 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 CBLL1Q75N03 491 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 ZC3H7AQ8IWR0 971 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 ATOH1Q92858 354 aaPredicted RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 RAB8BQ92930 207 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 PYURFQ96I23 114 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 RNF145Q96MT1 663 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 CHID1Q9BWS9 393 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 AGPAT4Q9NRZ5 378 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 RXFP3Q9NSD7 469 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 DDX18Q9NVP1 670 aaKnown RBP21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 RPS6KA6Q9UK32 745 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 SRPK3Q9UPE1 567 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 GPR179Q6PRD1 2367 aa21.45■■□□□ 1.02
SMARCB1-201ENST00000263121 A0A087WV62 115 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 TFPTP0C1Z6 253 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 FCGR1AP12314 374 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 HSD17B7P56937 341 aa21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 PCBP3P57721 371 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 TXNL4AP83876 142 aaKnown RBP21.44■■□□□ 1.02
SMARCB1-201ENST00000263121 MGAT2Q10469 447 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms