RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ESPNLQ6ZVH7 1005 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 GCDHQ92947 438 aaPredicted RBP12.32□□□□□ -0.44
SNX1-201ENST00000261889 RELTQ969Z4 430 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 KATNB1Q9BVA0 655 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 RNF208Q9H0X6 261 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 HCFC1R1Q9NWW0 138 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 ASIC5Q9NY37 505 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 NKIRAS2Q9NYR9 191 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 ENPP4Q9Y6X5 453 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 ERAL1O75616 437 aaKnown RBP12.32□□□□□ -0.44
SNX1-201ENST00000261889 CRYZL1O95825 349 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 SCG5P05408 212 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 DDX5P17844 614 aaKnown RBP12.32□□□□□ -0.44
SNX1-201ENST00000261889 ENPP1P22413 925 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 IL12RB1P42701 662 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 SLC16A1P53985 500 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 OLR1P78380 273 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 FAM205BPQ63HN1 556 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 GPR155Q7Z3F1 870 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 SHISA5Q8N114 240 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 CRIPAKQ8N1N5 446 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 C16orf78Q8WTQ4 265 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 SCRN2Q96FV2 425 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 SLC22A4Q9H015 551 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 OR2AG1Q9H205 316 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 FAM83DQ9H4H8 585 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
SNX1-201ENST00000261889 MED20Q9H944 212 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 EVA1BQ9NVM1 165 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 SPATA6Q9NWH7 488 aaPredicted RBP12.32□□□□□ -0.44
SNX1-201ENST00000261889 HCFC2Q9Y5Z7 792 aa12.32□□□□□ -0.44
SNX1-201ENST00000261889 LOC105369274A0A096LPK9 316 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 IFNA8P32881 189 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 GNG2P59768 71 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 DSTNP60981 165 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 HEPACAMQ14CZ8 416 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 OR4N4Q8N0Y3 316 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 DCAF4L2Q8NA75 395 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 GEMIN6Q8WXD5 167 aaKnown RBP12.31□□□□□ -0.44
SNX1-201ENST00000261889 TAPBPLQ9BX59 468 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 REEP4Q9H6H4 257 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 SEC14L3Q9UDX4 400 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 ZNF222Q9UK12 451 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 LEFTY1O75610 366 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 YES1P07947 543 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 PTPN2P17706 415 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 ELAVL4P26378 380 aaKnown RBP12.31□□□□□ -0.44
SNX1-201ENST00000261889 ZNF763Q0D2J5 394 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 POU4F3Q15319 338 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 HYAL4Q2M3T9 481 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 FBXO43Q4G163 708 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 SLC35F1Q5T1Q4 408 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 BCL2L15Q5TBC7 163 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 OR52I1Q8NGK6 324 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 CREB3L4Q8TEY5 395 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 ASZ1Q8WWH4 475 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 TM7SF3Q9NS93 570 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 KLK4Q9Y5K2 254 aa12.31□□□□□ -0.44
SNX1-201ENST00000261889 PRMT3O60678 531 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 ALX3O95076 343 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 IL1RNP18510 177 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 P2RX3P56373 397 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PODNL1Q6PEZ8 512 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.3□□□□□ -0.441e-7■■□□□ 14.4
SNX1-201ENST00000261889 VOPP1Q96AW1 172 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 ORAI1Q96D31 301 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 TDP1Q9NUW8 608 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 CUEDC1Q9NWM3 386 aaPredicted RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 REV1Q9UBZ9 1251 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 STUB1Q9UNE7 303 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 CSNK1G3Q9Y6M4 447 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 DOCK9Q9BZ29 2069 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 OR2B3O76000 313 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 C8GP07360 202 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 FURINP09958 794 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 ITGA2P17301 1181 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 CD9P21926 228 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 MMP11P24347 488 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 DDOSTP39656 456 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 AGFG1P52594 562 aaKnown RBP12.3□□□□□ -0.44
SNX1-201ENST00000261889 MESP2Q0VG99 397 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 GPR19Q15760 415 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 TIMM50Q3ZCQ8 353 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 IDNKQ5T6J7 187 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 PXDC1Q5TGL8 231 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 MED27Q6P2C8 311 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 C22orf39Q6P5X5 142 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 GAREM2Q75VX8 874 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 CHST9Q7L1S5 443 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 IZUMO1Q8IYV9 350 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
SNX1-201ENST00000261889 TMEM145Q8NBT3 493 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms