RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 DEFB134Q4QY38 66 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 NPLOC4Q8TAT6 608 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 MAELQ96JY0 434 aaKnown RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 PCTPQ9UKL6 214 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 SH3PXD2BA1X283 911 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 IFNA4P05014 189 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 HOXD8P13378 290 aaPredicted RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 CCL5P13501 91 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 ADH6P28332 368 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 TM4SF1P30408 202 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 OTX2P32243 289 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 HADHBP55084 474 aaKnown RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 UBE2NP61088 152 aaKnown RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 FAM214AQ32MH5 1076 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 BCL2L15Q5TBC7 163 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 CES4AQ5XG92 561 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 UGT2A3Q6UWM9 527 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 STRCP1A6NGW2 1772 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 LCHNA4D1U4 455 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 AOC2O75106 756 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 RAB15P59190 212 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 RPS26P62854 115 aaKnown RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 TRAM1Q15629 374 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 AWAT2Q6E213 333 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 FIGNL1Q6PIW4 674 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 Q6ZVL8 140 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 SLC35B2Q8TB61 432 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 LIN37Q96GY3 246 aaPredicted RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 PDE7BQ9NP56 450 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 APOC3P02656 99 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 MT-ND2P03891 347 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 SLC11A1P49279 550 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 IRF7Q92985 503 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 SCRN2Q96FV2 425 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 IL20RAQ9UHF4 553 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 ACSL6Q9UKU0 697 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 C12orf71A8MTZ7 269 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 TSPAN6O43657 245 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 FMO6PO60774 539 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 RFPL1O75677 317 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 IFNA10P01566 189 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 ADRB3P13945 408 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 SLC2A5P22732 501 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 ZNF136P52737 540 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 MSS51Q4VC12 460 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 FAM46BQ96A09 425 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 OR2M4Q96R27 311 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 LRFN1Q9P244 771 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 ANKRD28O15084 1053 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 PYCR1P32322 319 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 VASH1Q7L8A9 365 aaPredicted RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 CCDC28AQ8IWP9 274 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 HS3ST5Q8IZT8 346 aa13.67□□□□□ -0.22
CUX2-201ENST00000261726 WRAP73Q9P2S5 460 aaPredicted RBP13.67□□□□□ -0.22
CUX2-201ENST00000261726 FAAHO00519 579 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 OR8U9P0C7N5 309 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 KCNC1P48547 511 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GPX6P59796 221 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 BDH1Q02338 343 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 CLCA4Q14CN2 919 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 BCL2A1Q16548 175 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GSG1LQ6UXU4 331 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 MYRFLQ96LU7 910 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 ZDHHC18Q9NUE0 388 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 LILRB5O75023 590 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GPR143P51810 404 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 FXYD4P59646 89 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 RPS21P63220 83 aaKnown RBP13.66□□□□□ -0.22
CUX2-201ENST00000261726 KCNC3Q14003 757 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 PIGGQ5H8A4 983 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 ISOC1Q96CN7 298 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 PIP5K1AQ99755 562 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GPR174Q9BXC1 333 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 CD93Q9NPY3 652 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GNG13Q9P2W3 67 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 ACSL5Q9ULC5 683 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
CUX2-201ENST00000261726 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 OR6C4Q8NGE1 309 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 OR52E2Q8NGJ4 325 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 OR52P1PQ8NH57 321 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 OR5P2Q8WZ92 322 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
CUX2-201ENST00000261726 MUS81Q96NY9 551 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 NELL2Q99435 816 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 FAM83CQ9BQN1 747 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 PCDHGA2Q9Y5H1 932 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GOSR2O14653 212 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 DFNA5O60443 496 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 SNAP29O95721 258 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 DNASE1P24855 282 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GCGRP47871 477 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 PLEKHS1Q5SXH7 462 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 OSTM1Q86WC4 334 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 FTMTQ8N4E7 242 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 CHPT1Q8WUD6 406 aa13.66□□□□□ -0.22
CUX2-201ENST00000261726 GCDHQ92947 438 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms