RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TRPV4Q9HBA0 871 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 DZANK1Q9NVP4 752 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 PLEKHB1Q9UF11 243 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 NDOR1Q9UHB4 597 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 MOSPD1Q9UJG1 213 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 MYL12BO14950 172 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 LZTS3O60299 673 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CDRT1O95170 752 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CSF2P04141 144 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 FAM157BP0CG42 384 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 PRKAR1AP10644 381 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 PSKH1P11801 424 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 HLA-EP13747 358 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ADRB3P13945 408 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 MYL12AP19105 171 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 IMPA1P29218 277 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 UQCRC1P31930 480 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 RPL3P39023 403 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 RBBP4Q09028 425 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 C1DQ13901 141 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 DOC2AQ14183 400 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 DOC2BQ14184 412 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF658BQ4V348 819 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF628Q5EBL2 1059 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 TCEAL5Q5H9L2 206 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ANXA8L1Q5VT79 327 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 FAM46CQ5VWP2 391 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 RAET1GQ6H3X3 334 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 C12orf40Q86WS4 652 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 NPAS3Q8IXF0 933 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 CAMKK1Q8N5S9 505 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 C19orf18Q8NEA5 215 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 VPS37AQ8NEZ2 397 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 MYLIPQ8WY64 445 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 UBE2E3Q969T4 207 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 WDR34Q96EX3 536 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 LRRC3BQ96PB8 259 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 PKP4Q99569 1192 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 PIP5K1AQ99755 562 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 SOSTQ9BQB4 213 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 MARVELD1Q9BSK0 173 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 HDAC8Q9BY41 377 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 NARFLQ9H6Q4 476 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 TRIM45Q9H8W5 580 aaPredicted RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 ANKRA2Q9H9E1 313 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 RPL36Q9Y3U8 105 aaKnown RBP10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 DYRK1BQ9Y463 629 aa10.26□□□□□ -0.77
CHRNA1-201ENST00000261007 MUC22E2RYF6 1773 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 BET1O15155 118 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 AKR7A2O43488 359 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ORC5O43913 435 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PRAMEF4O60810 478 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 C1orf105O95561 183 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PDGFAP04085 211 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 C6P13671 934 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CNR2P34972 360 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SOX3P41225 446 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MAPK12P53778 367 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ERVK-21P61565 698 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PPP3R1P63098 170 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 HOXC5Q00444 222 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MRPL28Q13084 256 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 RPA4Q13156 261 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 RIN1Q13671 783 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SUZ12Q15022 739 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 DUSP6Q16828 381 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 TOR2AQ5JU69 321 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 FAM78AQ5JUQ0 283 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ZBTB37Q5TC79 503 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PRAMEF9Q5VWM5 478 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 HIST2H2AA3Q6FI13 130 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MED27Q6P2C8 311 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PAMR1Q6UXH9 720 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 UNC5DQ6UXZ4 953 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ERN2Q76MJ5 926 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CAMKMTQ7Z624 323 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 PHC2Q8IXK0 858 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 LAS2Q8IYD9 372 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CLECL1Q8IZS7 167 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SLC34A3Q8N130 599 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 FBXL6Q8N531 539 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CXorf40AQ8TE69 158 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SUSD6Q92537 303 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ARRDC3Q96B67 414 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 TRMT61AQ96FX7 289 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MED8Q96G25 268 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 DCLRE1CQ96SD1 692 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 FAM129BQ96TA1 746 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 CDCA3Q99618 268 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 WRAP53Q9BUR4 548 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 DUSP26Q9BV47 211 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 POLR2J2Q9GZM3 115 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 MTG2Q9H4K7 406 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 SGK2Q9HBY8 427 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ACER3Q9NUN7 267 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 TXNL4BQ9NX01 149 aaKnown RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 GLTPQ9NZD2 209 aa10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 ZNF282Q9UDV7 671 aaPredicted RBP10.25□□□□□ -0.77
CHRNA1-201ENST00000261007 HSPB11Q9Y547 144 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms