RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 A8MUA0 341 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 E9PBE3 544 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 CASQ2O14958 399 aaPredicted RBP15.67■□□□□ 0.1
SDCBP-201ENST00000260130 PEX1O43933 1283 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 GUCY1B2O75343 617 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 SERTAD2Q14140 314 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 SPIN4Q56A73 249 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 KANK2Q63ZY3 851 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 HPS6Q86YV9 775 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 PSMF1Q92530 271 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 TCF7L2Q9NQB0 619 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 VTI1BQ9UEU0 232 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 PRPF19Q9UMS4 504 aaKnown RBP15.67■□□□□ 0.1
SDCBP-201ENST00000260130 DNAJC15Q9Y5T4 150 aa15.67■□□□□ 0.1
SDCBP-201ENST00000260130 TLN1Q9Y490 2541 aaKnown RBP15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SLC22A2O15244 555 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 PRKRAO75569 313 aaKnown RBP15.66■□□□□ 0.1
SDCBP-201ENST00000260130 AIFM1O95831 613 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 CHEK2O96017 543 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 NR2F6P10588 404 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 ITGAMP11215 1152 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 PPP2R1BP30154 601 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SLC26A5P58743 744 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 ACSM2AQ08AH3 577 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SLC9B1Q4ZJI4 515 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SH2D4BQ5SQS7 431 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 ACSM2BQ68CK6 577 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 C16orf89Q6UX73 402 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 OR4N5Q8IXE1 308 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 BRIX1Q8TDN6 353 aaKnown RBP15.66■□□□□ 0.1
SDCBP-201ENST00000260130 TEX10Q9NXF1 929 aaPredicted RBP15.66■□□□□ 0.1
SDCBP-201ENST00000260130 MYOCOSA0A1B0GUC4 107 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SAGE2PA6NJ88 616 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 GLOD5A6NK44 160 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 FGF17O60258 216 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 IFNA16P05015 189 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 ID2Q02363 134 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 BIKQ13323 160 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 TRIP10Q15642 601 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 UGT3A2Q3SY77 523 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 NDUFAF5Q5TEU4 345 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 AP1ARQ63HQ0 302 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 LPCAT4Q643R3 524 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 RNF111Q6ZNA4 994 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 RNF165Q6ZSG1 346 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 PTRH1Q86Y79 214 aaKnown RBP15.66■□□□□ 0.1
SDCBP-201ENST00000260130 ZNF843Q8N446 348 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 STON2Q8WXE9 905 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 C11orf24Q96F05 449 aaPredicted RBP15.66■□□□□ 0.1
SDCBP-201ENST00000260130 BTBD9Q96Q07 612 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 MMP25Q9NPA2 562 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 ADAP2Q9NPF8 381 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SIRT5Q9NXA8 310 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 BCAP29Q9UHQ4 241 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 RAP2CQ9Y3L5 183 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 SCN2AQ99250 2005 aa15.66■□□□□ 0.1
SDCBP-201ENST00000260130 WASHC1A8K0Z3 465 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 TMEM233B4DJY2 109 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 SLC28A1O00337 649 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 C1QL1O75973 258 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 RSL1D1O76021 490 aaKnown RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 MYO1DO94832 1006 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 SNUPNO95149 360 aaKnown RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 TRA2BP62995 288 aaKnown RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 RAE1P78406 368 aaKnown RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 IGLV3-21P80748 117 aaPredicted RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 FOLH1Q04609 750 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 ELAVL1Q15717 326 aaKnown RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 LRRC36Q1X8D7 754 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 CRB2Q5IJ48 1285 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 GALNT18Q6P9A2 607 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 SIRT6Q8N6T7 355 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 NFAM1Q8NET5 270 aaPredicted RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 AGR3Q8TD06 166 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 UCN3Q969E3 161 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 TM4SF18Q96CE8 201 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 TUBB1Q9H4B7 451 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 C6orf203Q9P0P8 240 aaPredicted RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 PTGFRNQ9P2B2 879 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 ZDHHC2Q9UIJ5 367 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 CCL27Q9Y4X3 112 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 SLCO1B7G3V0H7 640 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 PGRMC2O15173 223 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 PCDH7O60245 1069 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 SORBS2O94875 1100 aaKnown RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 GPR75O95800 540 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 PEX2P28328 305 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 ADSLP30566 484 aaPredicted RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 AQP4P55087 323 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 LIN52Q52LA3 116 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 ISLR2Q6UXK2 745 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 TMEM132CQ8N3T6 1108 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 ICA1LQ8NDH6 482 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 DNAJB14Q8TBM8 379 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 ZBTB20Q9HC78 741 aaPredicted RBP15.65■□□□□ 0.1
SDCBP-201ENST00000260130 PTGDR2Q9Y5Y4 395 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 CLCA3PQ9Y6N3 262 aa15.65■□□□□ 0.1
SDCBP-201ENST00000260130 GNG14A0A1W2PPG7 69 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 HDAC3O15379 428 aa15.64■□□□□ 0.09
SDCBP-201ENST00000260130 RGS14O43566 566 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms