RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PLXNA2O75051 1894 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 URB1O60287 2271 aaKnown RBP13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 OR6C74A6NCV1 312 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 C2CD4DB7Z1M9 353 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 CHRM5P08912 532 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 CD36P16671 472 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 CD40LGP29965 261 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 PIK3CBP42338 1070 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 KCNJ10P78508 379 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 RPA4Q13156 261 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 AMIGO1Q86WK6 493 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 SVOPLQ8N434 492 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 DNAJB8Q8NHS0 232 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 S100ZQ8WXG8 99 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 ZHX1-C8orf76Q96EF9 292 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 C16orf58Q96GQ5 468 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 SLX1AQ9BQ83 275 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC6A20Q9NP91 592 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 OBP2AQ9NY56 170 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 COL4A3Q01955 1670 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 DNAJB6O75190 326 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 MFN2O95140 757 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 IL1RNP18510 177 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 DDCP20711 480 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 LTBRP36941 435 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 COPZ1P61923 177 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 RPP38P78345 283 aaKnown RBP13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 SIM1P81133 766 aaPredicted RBP13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC9A5Q14940 896 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 LTB4RQ15722 352 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 ATAD3BQ5T9A4 648 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 Q6ZSR6 202 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF438Q7Z4V0 828 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 P3H2Q8IVL5 708 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 LGI4Q8N135 537 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 DYNC2LI1Q8TCX1 351 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 NIPSNAP1Q9BPW8 284 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 ARPC5LQ9BPX5 153 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 WFDC6Q9BQY6 131 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 DSN1Q9H410 356 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 TM9SF3Q9HD45 589 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 MYNNQ9NPC7 610 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 TAS2R16Q9NYV7 291 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 NDUFAF4Q9P032 175 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 ANKMY1Q9P2S6 941 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 SEC14L3Q9UDX4 400 aa13.86□□□□□ -0.19
TRAFD1-201ENST00000257604 ANHXE9PGG2 379 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SNPHO15079 494 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC22A1O15245 554 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 HPRP00739 348 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 IGFBP1P08833 259 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SERPINB10P48595 397 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SELENOWP63302 87 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 IFI44LQ53G44 452 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 TAF8Q7Z7C8 310 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 CELF2-AS1Q8N7Q2 184 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 ACOT4Q8N9L9 421 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SIMC1Q8NDZ2 872 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 PJA1Q8NG27 643 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 OR2L3Q8NG85 312 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 OR10G2Q8NGC3 310 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 OR52N2Q8NGI0 321 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC38A5Q8WUX1 472 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 HHIPQ96QV1 700 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 CDCA3Q99618 268 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 LHX9Q9NQ69 397 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 DDX28Q9NUL7 540 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 CA14Q9ULX7 337 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 H3BN98 237 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 M0R3H8 397 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 PLRG1O43660 514 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 HOXB9P17482 250 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 CLK3P49761 638 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 ST13P50502 369 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 CRISP3P54108 245 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 GABARAPL2P60520 117 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 PPP1CAP62136 330 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SMUG1Q53HV7 270 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 UBE3DQ7Z6J8 389 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 OR13H1Q8NG92 308 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 VMP1Q96GC9 406 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 IL4I1Q96RQ9 567 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC6A14Q9UN76 642 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 AP3M1Q9Y2T2 418 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 MDC1Q14676 2089 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF106Q9H2Y7 1883 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SMIM30A4D0T7 59 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 LRIT2A6NDA9 550 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 CDC123O75794 336 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 KRT75O95678 551 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 FPR1P21462 350 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 MVDP53602 400 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 DAB2P98082 770 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 DBPQ10586 325 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SHQ1Q6PI26 577 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 ARMC8Q8IUR7 673 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 FBXO15Q8NCQ5 510 aaPredicted RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC9A6Q92581 669 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF300Q96RE9 604 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms