RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CYP4B1P13584 511 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 PKLRP30613 574 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 MAP3K8P41279 467 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 TRIM25Q14258 630 aaKnown RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 WSCD2Q2TBF2 565 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 CRB2Q5IJ48 1285 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 SHFQ7M4L6 423 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF619Q8N2I2 560 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 NPWQ8N729 165 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 GOT1L1Q8NHS2 421 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 HUS1BQ8NHY5 278 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 NTMT1Q9BV86 223 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 TCF7L1Q9HCS4 588 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 DMRT3Q9NQL9 472 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 EIF1BO60739 113 aaKnown RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 ZER1Q7Z7L7 766 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 CNTN4Q8IWV2 1026 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 KAT2AQ92830 837 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 ERVMER34-1Q9H9K5 563 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 ACSS1Q9NUB1 689 aaPredicted RBP12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 ZDHHC18Q9NUE0 388 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 WIF1Q9Y5W5 379 aa12.76□□□□□ -0.37
PRPF38A-201ENST00000257181 BCKDKO14874 412 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 OR1I1O60431 355 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CRABP1P29762 137 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CHRNB4P30926 498 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CMIPQ8IY22 773 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC43A2Q8N370 569 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 OR1E3Q8WZA6 343 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SGCDQ92629 289 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 TRAPPC9Q96Q05 1148 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 MECRQ9BV79 373 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 UCK2Q9BZX2 261 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 FOXQ1Q9C009 403 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 GRIP2Q9C0E4 1043 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 DSN1Q9H410 356 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SEC61A2Q9H9S3 476 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PLGRKTQ9HBL7 147 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 DAPL1A0PJW8 107 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ALOX12BO75342 701 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PDYNP01213 254 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF888P0CJ79 500 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PITX1P78337 314 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PITPNAQ00169 270 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF829Q3KNS6 432 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 OR5M3Q8NGP4 307 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 C16orf78Q8WTQ4 265 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 NINJ1Q92982 152 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 GABRG3Q99928 467 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ANXA2P2A6NMY6 339 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 RAB2AP61019 212 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 REEP5Q00765 189 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 FASTKD3Q14CZ7 662 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 TPRG1LQ5T0D9 272 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PM20D2Q8IYS1 436 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 IZUMO1Q8IYV9 350 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 HSPBAP1Q96EW2 488 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ADAD1Q96M93 576 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF317Q96PQ6 595 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 BCL2L14Q9BZR8 327 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SPRTNQ9H040 489 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 GEMIN8Q9NWZ8 242 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 FIGNL2A6NMB9 653 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 HAT1O14929 419 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 GMFGO60234 142 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 C9P02748 559 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ANXA2P07355 339 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 THRBP10828 461 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF43P17038 809 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CYB561P49447 251 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 HMGCS1Q01581 520 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CEP78Q5JTW2 689 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ANKRD26P1Q6NSI1 321 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ADIPOR2Q86V24 386 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 OR52P1PQ8NH57 321 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CREB3L4Q8TEY5 395 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PIWIL1Q96J94 861 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 INSM2Q96T92 566 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 NUAK2Q9H093 628 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 C6orf106Q9H6K1 298 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CMTM6Q9NX76 183 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 WASF2Q9Y6W5 498 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 SAGE2PA6NJ88 616 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 UBAP2LQ14157 1087 aaKnown RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 CCDC116Q8IYX3 515 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 ARRDC2Q8TBH0 407 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 PWWP2AQ96N64 755 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 F2RL3Q96RI0 385 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 NPAS2Q99743 824 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 BTBD2Q9BX70 525 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 RABL2AQ9UBK7 228 aaPredicted RBP12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 RABL2BQ9UNT1 228 aa12.75□□□□□ -0.37
PRPF38A-201ENST00000257181 LOC102723532A0A0G2JNH3 316 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms