RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 MTHFD2P13995 350 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 PTX3P26022 381 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 PIGAP37287 484 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 FOLH1Q04609 750 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 C1orf185Q5T7R7 199 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 ST13P4Q8IZP2 240 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 ACMSDQ8TDX5 336 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 GAL3ST4Q96RP7 486 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 MTERF1Q99551 399 aaKnown RBP11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 CNPPD1Q9BV87 410 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 SORBS1Q9BX66 1292 aaKnown RBP11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 WDR41Q9HAD4 459 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 ZFP64Q9NPA5 681 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 SEMA4BQ9NPR2 832 aaPredicted RBP11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 DMRT3Q9NQL9 472 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 LYARQ9NX58 379 aaKnown RBP11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 QPCTLQ9NXS2 382 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 ALKBH4Q9NXW9 302 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 CNIH4Q9P003 139 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 TNFRSF10DQ9UBN6 386 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
APOBEC3A-201ENST00000249116 A0A0G2JNJ9 132 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 OR6C76A6NM76 312 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 PLPP1O14494 284 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 PROM1O43490 865 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZWINTO95229 277 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 NADKO95544 446 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 RBP1P09455 135 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 GFAPP14136 432 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 CD1EP15812 388 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 SERPINB3P29508 390 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 RPS13P62277 151 aaKnown RBP11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 HERVK_113P63132 956 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 ERVK-8P63133 956 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 IFFO1Q0D2I5 559 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 SETDB1Q15047 1291 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 SPRED3Q2MJR0 410 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 SLC25A35Q3KQZ1 300 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 C18orf63Q68DL7 685 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 CYP20A1Q6UW02 462 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 RNF111Q6ZNA4 994 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 FBXW8Q8N3Y1 598 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 LIX1Q8N485 282 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 RNF175Q8N4F7 328 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZNF454Q8N9F8 522 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 ERVK-6Q9BXR3 956 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 SH2D2AQ9NP31 389 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 B4GALT7Q9UBV7 327 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 Q9UFV3 132 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 ERVK-19Q9WJR5 959 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 PCDHGB3Q9Y5G1 929 aa11.89□□□□□ -0.51
APOBEC3A-201ENST00000249116 A0A1W2PPM1 405 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 CAPN14A8MX76 684 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 H0YIV9 168 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 GOLGA8RI6L899 631 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 HRKO00198 91 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 UGDHO60701 494 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 GPR75O95800 540 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 FBXO45P0C2W1 286 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 NR2F6P10588 404 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 KRT15P19012 456 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 GALNSP34059 522 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 PIK3CGP48736 1102 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 ALDH18A1P54886 795 aaKnown RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 HNRNPH2P55795 449 aaKnown RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 CUL3Q13618 768 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 ZNF267Q14586 743 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 PFKFB4Q16877 469 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 TBCELQ5QJ74 424 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 RIPPLY2Q5TAB7 128 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 PRAMEF20Q5VT98 475 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 LYPD8Q6UX82 237 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 DGAT2L6Q6ZPD8 337 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 TAGAPQ8N103 731 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 RIT1Q92963 219 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 JSRP1Q96MG2 331 aaPredicted RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 MRPL57Q9BQC6 102 aaKnown RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 WWTR1Q9GZV5 400 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 MRPL46Q9H2W6 279 aaKnown RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 ACKR4Q9NPB9 350 aa11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
APOBEC3A-201ENST00000249116 TLDC2A0PJX2 215 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 CCDC151A5D8V7 595 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 TP53I11O14683 189 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 ERLIN1O75477 346 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 RFPL3SP0C7P2 107 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 FAM58BPP0C7Q3 252 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 PEX19P40855 299 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 SLC37A1P57057 533 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 GTF2H2Q13888 395 aa11.87□□□□□ -0.51
APOBEC3A-201ENST00000249116 CPSF6Q16630 551 aaKnown RBP eCLIP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms