RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LIN28AQ9H9Z2 209 aaKnown RBP22.57■■□□□ 1.2
SDF2L1-201ENST00000248958 LRTM1Q9HBL6 345 aa22.57■■□□□ 1.2
SDF2L1-201ENST00000248958 TIMMDC1Q9NPL8 285 aa22.57■■□□□ 1.2
SDF2L1-201ENST00000248958 ERVK-11Q9UQG0 969 aa22.57■■□□□ 1.2
SDF2L1-201ENST00000248958 ASPDHA6ND91 283 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 ANKUB1A6NFN9 424 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 KLRC4-KLRK1H3BQV0 150 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 HRKO00198 91 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 DHRS4L1P0CG22 281 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 ST13P50502 369 aaKnown RBP22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 MAP4K2Q12851 820 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 KIAA0040Q15053 153 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 PIGGQ5H8A4 983 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 NOXRED1Q6NXP6 359 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 Q6ZSR9 355 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 IKBIPQ70UQ0 350 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 DND1Q8IYX4 353 aaKnown RBP22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 MMP21Q8N119 569 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 LRRC25Q8N386 305 aaPredicted RBP22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 TWIST2Q8WVJ9 160 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 ZNF681Q96N22 645 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 CCT7Q99832 543 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 MYNNQ9NPC7 610 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 PFDN4Q9NQP4 134 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 CFL2Q9Y281 166 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 TMED5Q9Y3A6 229 aa22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 SPENQ96T58 3664 aaKnown RBP22.56■■□□□ 1.2
SDF2L1-201ENST00000248958 A0A1W2PS29 197 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 TMEM114B3SHH9 223 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 SERPINE1P05121 402 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 DDCP20711 480 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 FEN1P39748 380 aaKnown RBP22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 UQCRFS1P47985 274 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 C2orf80Q0P641 193 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 PRICKLE4Q2TBC4 344 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 UGT3A2Q3SY77 523 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 C16orf47Q6ZP98 133 aaPredicted RBP22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 KIRREL3Q8IZU9 778 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 POGLUT1Q8NBL1 392 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 TP53INP1Q96A56 240 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 CNRIP1Q96F85 164 aaPredicted RBP22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 SGCZQ96LD1 299 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 HES7Q9BYE0 225 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 TUBB1Q9H4B7 451 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 ENTPD4Q9Y227 616 aa22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 POLR3HQ9Y535 204 aaPredicted RBP22.55■■□□□ 1.2
SDF2L1-201ENST00000248958 CT62P0C5K7 136 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 LINC00032P0C843 101 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 GRK2P25098 689 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 SOX3P41225 446 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 MRPL49Q13405 166 aaKnown RBP22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 CASP8Q14790 479 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 EBPQ15125 230 aaKnown RBP22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 CEBPEQ15744 281 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 ZNF750Q32MQ0 723 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 HLA-DQA1Q5Y7H0 255 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 FAM71E1Q6IPT2 247 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 IL20RBQ6UXL0 311 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 DDIASQ8IXT1 998 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 VWA5B2Q8N398 1253 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 GOLM1Q8NBJ4 401 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 PKNOX2Q96KN3 472 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 FCRL1Q96LA6 429 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 BRINP2Q9C0B6 783 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 WWTR1Q9GZV5 400 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 OR10A5Q9H207 317 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 TMBIM4Q9HC24 238 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 MIEF1Q9NQG6 463 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 SLC35C2Q9NQQ7 365 aa22.54■■□□□ 1.2
SDF2L1-201ENST00000248958 C2orf92A0A1B0GVN3 265 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 WDR91A4D1P6 747 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 BCAS2O75934 225 aaPredicted RBP22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 OR6B1O95007 311 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 HSPA4LO95757 839 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 CLPSP04118 112 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 SSTR4P31391 388 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 TDGF1P3P51864 188 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 SLC18A1P54219 525 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 ESPL1Q14674 2120 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 CHI3L2Q15782 390 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 FHL5Q5TD97 284 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 RTL4Q6ZR62 310 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 ZNF615Q8N8J6 731 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 ZNF675Q8TD23 568 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 DOK4Q8TEW6 326 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 EXOSC8Q96B26 276 aaKnown RBP22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 CTHRC1Q96CG8 243 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 ERP27Q96DN0 273 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 PPP3R2Q96LZ3 170 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 GAL3ST4Q96RP7 486 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 TAS2R7Q9NYW3 318 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 MAT2BQ9NZL9 334 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 ZDHHC2Q9UIJ5 367 aa22.53■■□□□ 1.2
SDF2L1-201ENST00000248958 PIP5K1BO14986 540 aa22.52■■□□□ 1.2
SDF2L1-201ENST00000248958 LSM1O15116 133 aaKnown RBP22.52■■□□□ 1.2
SDF2L1-201ENST00000248958 MPIP34949 423 aa22.52■■□□□ 1.2
SDF2L1-201ENST00000248958 ABCE1P61221 599 aaKnown RBP22.52■■□□□ 1.2
SDF2L1-201ENST00000248958 ALDH6A1Q02252 535 aaKnown RBP22.52■■□□□ 1.2
SDF2L1-201ENST00000248958 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms