RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 EPOPA6NHQ4 379 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 H3BN98 237 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 K7EQS6 105 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PDE9AO76083 593 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CERS1P27544 350 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 RPS21P63220 83 aaKnown RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 FUT5Q11128 374 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 LASP1Q14847 261 aaKnown RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 SLC9A5Q14940 896 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 AGERQ15109 404 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 MED22Q15528 200 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 ZIC1Q15915 447 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TRIM16LQ309B1 348 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TOR1AIP1Q5JTV8 583 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 MEX3DQ86XN8 651 aaKnown RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CLIP4Q8N3C7 705 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 ACOT4Q8N9L9 421 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PSMA8Q8TAA3 256 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 S100ZQ8WXG8 99 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CNRIP1Q96F85 164 aaPredicted RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 C16orf58Q96GQ5 468 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CHCHD6Q9BRQ6 235 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TIMM29Q9BSF4 260 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CENPOQ9BU64 300 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TRMT61BQ9BVS5 477 aaKnown RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PBX4Q9BYU1 374 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PITHD1Q9GZP4 211 aaPredicted RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 DSN1Q9H410 356 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TLR4O00206 839 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 ZW10O43264 779 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 RNGTTO60942 597 aaKnown RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 EML2O95834 649 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 EPPINO95925 133 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CHRM4P08173 479 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 OSMP13725 252 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 SNRPNP63162 240 aaKnown RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TARDBPQ13148 414 aaKnown RBP eCLIP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 RPE65Q16518 533 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PGBD2Q6P3X8 592 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TMEM107Q6UX40 140 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 IQCF1Q8N6M8 205 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 OR2L3Q8NG85 312 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 SUN3Q8TAQ9 357 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PRR14Q9BWN1 585 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 FGF22Q9HCT0 170 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 PRDM7Q9NQW5 492 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 POLE4Q9NR33 117 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CLN6Q9NWW5 311 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 TAS2R7Q9NYW3 318 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 A4GNTQ9UNA3 340 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 SLC17A4Q9Y2C5 497 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 CA5BQ9Y2D0 317 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 ASB4Q9Y574 426 aa16.41■□□□□ 0.22
LRFN3-201ENST00000246529 GPC6Q9Y625 555 aaPredicted RBP16.41■□□□□ 0.22
LRFN3-201ENST00000246529 GPR89AB7ZAQ6 455 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 ADAP00813 363 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 GPR89BP0CG08 455 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 DRD2P14416 443 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 HIST1H1TP22492 207 aaPredicted RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 RGS6P49758 472 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 LRRC32Q14392 662 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 ZNF776Q68DI1 518 aaPredicted RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 ABHD17CQ6PCB6 329 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 FAM46DQ8NEK8 389 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 IFT52Q9Y366 437 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3DA0A087WVF3 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3IA0A087WXS9 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3EA0A087X179 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3KA0A087X1G2 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3FA6NER0 549 aaPredicted RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3LB9A6J9 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 DSCR3O14972 297 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 AIFM1O95831 613 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 HMGN2P05204 90 aaKnown RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3HP0C7X1 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 KIR2DL1P43626 348 aaPredicted RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 BCAP31P51572 246 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 CLDN2P57739 230 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 RPS3AP61247 264 aaKnown RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TEKQ02763 1124 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 DNASE1L3Q13609 305 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 ITPRIPL2Q3MIP1 535 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3GQ6DHY5 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3CQ6IPX1 549 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 PODNL1Q6PEZ8 512 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 SYCE2Q6PIF2 218 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D3Q8IZP1 549 aaPredicted RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 TBC1D19Q8N5T2 526 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 WDR36Q8NI36 951 aaKnown RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 C6orf62Q9GZU0 229 aaPredicted RBP16.4■□□□□ 0.22
LRFN3-201ENST00000246529 EQTNQ9NQ60 294 aa16.4■□□□□ 0.22
LRFN3-201ENST00000246529 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.22
LRFN3-201ENST00000246529 TRBV23OR9-2A0A075B6M9 112 aa16.39■□□□□ 0.21
LRFN3-201ENST00000246529 FAAHO00519 579 aa16.39■□□□□ 0.21
LRFN3-201ENST00000246529 PRICKLE3O43900 615 aaPredicted RBP16.39■□□□□ 0.21
LRFN3-201ENST00000246529 SERPINB7O75635 380 aa16.39■□□□□ 0.21
LRFN3-201ENST00000246529 RPLP0P05388 317 aaKnown RBP16.39■□□□□ 0.21
LRFN3-201ENST00000246529 TNNI3P19429 210 aa16.39■□□□□ 0.21
LRFN3-201ENST00000246529 ATP5A1P25705 553 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms