RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 FAM172BPA6NC97 362 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 C1orf105O95561 183 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 GYPBP06028 91 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 CCR2P41597 374 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 MC3RP41968 323 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 ELAVL3Q14576 367 aaKnown RBP13.03□□□□□ -0.32
NCLN-201ENST00000246117 C16orf58Q96GQ5 468 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 NLKQ9UBE8 527 aa13.03□□□□□ -0.32
NCLN-201ENST00000246117 TRIOBPQ9H2D6 2365 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 FAM171A2A8MVW0 826 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 H7C0S8 307 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 CHMP24386 653 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 IRS1P35568 1242 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 E2F2Q14209 437 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 TRIM71Q2Q1W2 868 aaKnown RBP13.02□□□□□ -0.32
NCLN-201ENST00000246117 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 PAQR6Q6TCH4 344 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 HTR3DQ70Z44 454 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 ZNF438Q7Z4V0 828 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 KLHDC8AQ8IYD2 350 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 LRRC17Q8N6Y2 441 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 CELF2-AS1Q8N7Q2 184 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 TMCO6Q96DC7 493 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.32
NCLN-201ENST00000246117 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 STARD5Q9NSY2 213 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 SIRT5Q9NXA8 310 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 NDUFAF4Q9P032 175 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 DNMT3BQ9UBC3 853 aaKnown RBP13.02□□□□□ -0.32
NCLN-201ENST00000246117 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 HSPB11Q9Y547 144 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 SVILO95425 2214 aa13.02□□□□□ -0.32
NCLN-201ENST00000246117 EDDM13A0A1B0GTR0 161 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 A0A1W2PQL4 384 aaPredicted RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 STX11O75558 287 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 SEC14L2O76054 403 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 CTSAP10619 480 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 RHCEP18577 417 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 ZNF10P21506 573 aaPredicted RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 AHCYP23526 432 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 CD97P48960 835 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 RGS6P49758 472 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 TUBA1BP68363 451 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 ASTLQ6HA08 431 aaPredicted RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 TUBA1AQ71U36 451 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 CXXC5Q7LFL8 322 aaKnown RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 PIK3R3Q92569 461 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 CXorf36Q9H7Y0 433 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 TMEM27Q9HBJ8 222 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 SMURF1Q9HCE7 757 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 NUFIP1Q9UHK0 495 aaKnown RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 A0A1W2PRG6 482 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 SLITRK5O94991 958 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 CD160O95971 181 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 MYOGP15173 224 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 GGT2P36268 569 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 GCGRP47871 477 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 GABARAPL2P60520 117 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 ZNF234Q14588 700 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
NCLN-201ENST00000246117 NRMQ8IXM6 262 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 NUP43Q8NFH3 380 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 SLC28A3Q9HAS3 691 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 PLEKHM1Q9Y4G2 1056 aa13.02□□□□□ -0.33
NCLN-201ENST00000246117 SCN3AQ9NY46 2000 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 RIIAD1A6NNX1 92 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 HYAL3O43820 417 aaPredicted RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 WBP4O75554 376 aaKnown RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 ILF3Q12906 894 aaKnown RBP eCLIP13.01□□□□□ -0.33
NCLN-201ENST00000246117 HLA-DQA1Q5Y7H0 255 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 ZNF544Q6NX49 715 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 RTL4Q6ZR62 310 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 OR9A2Q8NGT5 310 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 ZNF563Q8TA94 476 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 RASSF5Q8WWW0 418 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 POP5Q969H6 163 aaKnown RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 TESCQ96BS2 214 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 SIPA1Q96FS4 1042 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 MND1Q9BWT6 205 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 TBCCD1Q9NVR7 557 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 GMEB1Q9Y692 573 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 ATAD5Q96QE3 1844 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 PLD2O14939 933 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 CD72P21854 359 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 RCVRNP35243 200 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 SOX2P48431 317 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 VEGFBP49765 207 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 FADDQ13158 208 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 BCL7AQ4VC05 210 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 SLC27A4Q6P1M0 643 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms