RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 LRCH1Q9Y2L9 728 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 A0A1W2PQM1 296 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 H0YJX3 145 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 M0QX08 132 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 PLOD2O00469 737 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 SOCS2O14508 198 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 PCDHGA12O60330 932 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 OR2B3O76000 313 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ATP1B1P05026 303 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 OR12D1P0DN82 309 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 FOLR1P15328 257 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 MATN1P21941 496 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ZNF574Q6ZN55 896 aaPredicted RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 OR7G2Q8NG99 324 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 OR5D16Q8NGK9 328 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ANKRD9Q96BM1 317 aaPredicted RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 TAMM41Q96BW9 452 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 BTBD9Q96Q07 612 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 VCXQ9H320 206 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ZNF768Q9H5H4 540 aaKnown RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 CLK4Q9HAZ1 481 aaKnown RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 IL1RAPQ9NPH3 570 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 THUMPD1Q9NXG2 353 aaKnown RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 HCN3Q9P1Z3 774 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 DNAJB9Q9UBS3 223 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 GMEB2Q9UKD1 530 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ATXN7L1Q9ULK2 861 aaPredicted RBP14.29□□□□□ -0.12
HDHD3-201ENST00000238379 ANGPT4Q9Y264 503 aa14.29□□□□□ -0.12
HDHD3-201ENST00000238379 PRAMEF27A3QJZ7 478 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 TMEM150CB9EJG8 249 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 PDLIM1O00151 329 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 TOX3O15405 576 aaPredicted RBP14.28□□□□□ -0.12
HDHD3-201ENST00000238379 SUV39H1O43463 412 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 CST1P01037 141 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 BCHEP06276 602 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 SYPP08247 313 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 RNH1P13489 461 aaKnown RBP14.28□□□□□ -0.12
HDHD3-201ENST00000238379 SELENOWP63302 87 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 CCL7P80098 99 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 MRPS35P82673 323 aaKnown RBP14.28□□□□□ -0.12
HDHD3-201ENST00000238379 MAT1AQ00266 395 aaKnown RBP14.28□□□□□ -0.12
HDHD3-201ENST00000238379 LASP1Q14847 261 aaKnown RBP14.28□□□□□ -0.12
HDHD3-201ENST00000238379 NRF1Q16656 503 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 ZDHHC21Q8IVQ6 265 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 CBR4Q8N4T8 237 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 NUP43Q8NFH3 380 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 OR1L3Q8NH93 324 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 NAT6Q93015 286 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 C16orf58Q96GQ5 468 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 TMEM19Q96HH6 336 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 DOHHQ9BU89 302 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 C9orf16Q9BUW7 83 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 ZNF639Q9UID6 485 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 TMEM184BQ9Y519 407 aaPredicted RBP14.28□□□□□ -0.12
HDHD3-201ENST00000238379 SCN2AQ99250 2005 aa14.28□□□□□ -0.12
HDHD3-201ENST00000238379 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 C7orf72A4D263 438 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 H0YIG0 161 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 PGM3O95394 542 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 CPNE6O95741 557 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 OPN1SWP03999 348 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 RPSAP08865 295 aaKnown RBP14.27□□□□□ -0.12
HDHD3-201ENST00000238379 GCGRP47871 477 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 AVPR1BP47901 424 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 MAN2A2P49641 1150 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 KHKP50053 298 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 CLCN2P51788 898 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 KCNJ10P78508 379 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 VLDLRP98155 873 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 SYT16Q17RD7 645 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 FAM214AQ32MH5 1076 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 IQCCQ4KMZ1 466 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 ZNF628Q5EBL2 1059 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 FKBP9P1Q75LS8 142 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 PATL1Q86TB9 770 aaKnown RBP14.27□□□□□ -0.12
HDHD3-201ENST00000238379 OR2L13Q8N349 312 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 PACRGLQ8N7B6 248 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 XAGE5Q8WWM1 108 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 MMABQ96EY8 250 aaPredicted RBP14.27□□□□□ -0.12
HDHD3-201ENST00000238379 GIMAP5Q96F15 307 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 PEX11GQ96HA9 241 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 TPD52L3Q96J77 140 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 VPS50Q96JG6 964 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 C7orf34Q96L11 122 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 ZNF597Q96LX8 424 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 YIPF4Q9BSR8 244 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 GTPBP2Q9BX10 602 aaKnown RBP14.27□□□□□ -0.12
HDHD3-201ENST00000238379 SMOC1Q9H4F8 434 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 CUTCQ9NTM9 273 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 PDP2Q9P2J9 529 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 TRPC4Q9UBN4 977 aa14.27□□□□□ -0.12
HDHD3-201ENST00000238379 MYOCOSA0A1B0GUC4 107 aa14.27□□□□□ -0.13
HDHD3-201ENST00000238379 RPLP0P05388 317 aaKnown RBP14.27□□□□□ -0.13
HDHD3-201ENST00000238379 CKMT1AP12532 417 aa14.27□□□□□ -0.13
HDHD3-201ENST00000238379 UQCRBP14927 111 aa14.27□□□□□ -0.13
HDHD3-201ENST00000238379 MPLP40238 635 aa14.27□□□□□ -0.13
HDHD3-201ENST00000238379 ANXA11P50995 505 aaKnown RBP14.27□□□□□ -0.13
HDHD3-201ENST00000238379 PROX2Q3B8N5 592 aa14.27□□□□□ -0.13
HDHD3-201ENST00000238379 RPS26P11Q5JNZ5 115 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms