RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MRPS35P82673 323 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC25A3Q00325 362 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ELAVL1Q15717 326 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCDC81Q6ZN84 652 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 CPEB2Q7Z5Q1 589 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 UBE3DQ7Z6J8 389 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 VASH2Q86V25 355 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC5A8Q8N695 610 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 TPT1P8Q9HAU6 139 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SIDT1Q9NXL6 827 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 FOXJ2Q9P0K8 574 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 PCDHGA7Q9Y5G6 932 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 FAM47E-STBD1D6RA91 191 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 H3BNH8 94 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 PCDH17O14917 1159 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ALPPP05187 535 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 CASP9P55211 416 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 NCALDP61601 193 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 RPP38P78345 283 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 E2F2Q14209 437 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SSPNQ14714 243 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ABHD17BQ5VST6 288 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR2Y1Q8NGV0 311 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 C8orf44Q96CB5 159 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 VN1R1Q9GZP7 353 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 THUMPD1Q9NXG2 353 aaKnown RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SELENONQ9NZV5 590 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 IGHV3-20A0A0C4DH32 117 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR2W5A6NFC9 320 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF891A8MT65 544 aaPredicted RBP10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZFAND5O76080 213 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 MATN1P21941 496 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 MC3RP41968 323 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 EXT1Q16394 746 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 DECR1Q16698 335 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 PDSS2Q86YH6 399 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 CGREF1Q99674 301 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 TCFL5Q9UL49 500 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 POLHQ9Y253 713 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 PTGER1P34995 402 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC7A2P52569 658 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 KIAA0040Q15053 153 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 UGT8Q16880 541 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 GCNT6Q5T4J0 391 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 C1orf146Q5VVC0 180 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 QSOX2Q6ZRP7 698 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 RNF148Q8N7C7 305 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 STON2Q8WXE9 905 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 FIG4Q92562 907 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 SPATA5L1Q9BVQ7 753 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 DLL3Q9NYJ7 618 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 BTNL2Q9UIR0 455 aa10.44□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF195O14628 629 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLITRK5O94991 958 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 SOX30O94993 753 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 TMED10P49755 219 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 FOXD4Q12950 439 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 C6orf120Q7Z4R8 191 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 MMP21Q8N119 569 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR8J2Q8NGG1 315 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC22A8Q8TCC7 542 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 CALML5Q9NZT1 146 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 MAP10Q9P2G4 905 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 KLK13Q9UKR3 277 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 C2orf92A0A1B0GVN3 265 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 GNGT2O14610 69 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 NUDT14O95848 222 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 RPS18P62269 152 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF750Q32MQ0 723 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 LRRC23Q53EV4 343 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 SPATA24Q86W54 205 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 TMEM125Q96AQ2 219 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 LRRC58Q96CX6 371 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 WDR54Q9H977 334 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 EML5Q05BV3 1969 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 A0A096LPI6 279 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 TRBV11-1A0A0K0K1C0 115 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 GTPBP1O00178 669 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 MASP1P48740 699 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 RAE1P78406 368 aaKnown RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 TOMM20Q15388 145 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 VMP1Q96GC9 406 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 SENP5Q96HI0 755 aaPredicted RBP10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF607Q96SK3 696 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 BTBD10Q9BSF8 475 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 PTGFRNQ9P2B2 879 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 DTNAQ9Y4J8 743 aa10.43□□□□□ -0.74
TNFAIP3-201ENST00000237289 C9orf172C9J069 976 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 SERPINB7O75635 380 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 DNAJC8O75937 253 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 GABRA3P34903 492 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 STT3AP46977 705 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 NNATQ16517 81 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 C11orf65Q8NCR3 313 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR52R1Q8NGF1 315 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.42□□□□□ -0.742e-9■■■■■ 37.4
TNFAIP3-201ENST00000237289 GLIPR2Q9H4G4 154 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 FAM32AQ9Y421 112 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF106Q9H2Y7 1883 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms