RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 NEK5Q6P3R8 708 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 TTLL10Q6ZVT0 673 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 NLRP14Q86W24 1093 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 HORMAD1Q86X24 394 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 EPHX4Q8IUS5 362 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 KATNAL2Q8IYT4 538 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 RBFAQ8N0V3 343 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 RYBPQ8N488 228 aaPredicted RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 CAMKVQ8NCB2 501 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 OR2A12Q8NGT7 310 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 EXD1Q8NHP7 514 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 CFAP61Q8NHU2 1237 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 HCAR2Q8TDS4 363 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 TRPC4APQ8TEL6 797 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 STARD8Q92502 1023 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 P3H4Q92791 437 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 RAB7BQ96AH8 199 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 TMEM18Q96B42 140 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 MSI2Q96DH6 328 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 BMFQ96LC9 184 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 CSPG4P5Q96PW8 444 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 NAP1L3Q99457 506 aaPredicted RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 MMP27Q9H306 513 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 TOR3AQ9H497 397 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 COPS7BQ9H9Q2 264 aaPredicted RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 HINT3Q9NQE9 182 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 UBA2Q9UBT2 640 aaPredicted RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 APOBEC3BQ9UH17 382 aaKnown RBP6.5□□□□□ -1.37
CCL1-201ENST00000225842 IL36AQ9UHA7 158 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 DNPEPQ9ULA0 475 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 CCDC168Q8NDH2 2452 aa6.5□□□□□ -1.37
CCL1-201ENST00000225842 MACROD2A1Z1Q3 448 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 DFFAO00273 331 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 RAD51BO15315 384 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 SORBS2O94875 1100 aaKnown RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 GOSR1O95249 250 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 SRCP12931 536 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 KDELR1P24390 212 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 CCNCP24863 283 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 RABIFP47224 123 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 DNA2P51530 1060 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 ARSEP51690 589 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 RHOAP61586 193 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 AP1S1P61966 158 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 ELP6Q0PNE2 266 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 DPYSQ14117 519 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 KRT33BQ14525 404 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 C16orf72Q14CZ0 275 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 ZNF674Q2M3X9 581 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 ANKRD20A8PQ5CZ79 823 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 MARC1Q5VT66 337 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 C22orf39Q6P5X5 142 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 ERN2Q76MJ5 926 aaKnown RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 TRILQ7L0X0 811 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 PIWIL3Q7Z3Z3 882 aaKnown RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 LDB1Q86U70 411 aaPredicted RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 GPSM1Q86YR5 675 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 NAT8LQ8N9F0 302 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 SCCPDHQ8NBX0 429 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 OR6C4Q8NGE1 309 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 OR2AP1Q8NGE2 309 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 FAM162AQ96A26 154 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 OTULINQ96BN8 352 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 TRIM44Q96DX7 344 aaPredicted RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 VAT1Q99536 393 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 SLC25A23Q9BV35 468 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 C1QTNF7Q9BXJ2 289 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 FRMD8P1Q9BZ68 369 aaPredicted RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 POLR1EQ9GZS1 481 aaKnown RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 TCEAL2Q9H3H9 227 aaPredicted RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 ATP13A3Q9H7F0 1226 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 MKKSQ9NPJ1 570 aaPredicted RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 TMEM45AQ9NWC5 275 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 KLHL13Q9P2N7 655 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
CCL1-201ENST00000225842 ALG6Q9Y672 507 aa6.49□□□□□ -1.37
CCL1-201ENST00000225842 SVILO95425 2214 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 COL27A1Q8IZC6 1860 aaPredicted RBP6.48□□□□□ -1.37
CCL1-201ENST00000225842 A0A0U1RQK1 487 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 LOC101059948A0A1B0GTJ6 334 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 ZNF320A2RRD8 509 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 CGB1A6NKQ9 187 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 HACD1B0YJ81 288 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 FAM72CH0Y354 149 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 APOC4-APOC2K7ER74 178 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 KPNA3O00505 521 aaPredicted RBP6.48□□□□□ -1.37
CCL1-201ENST00000225842 PRPF4O43172 522 aaKnown RBP eCLIP6.48□□□□□ -1.37
CCL1-201ENST00000225842 KIF5CO60282 957 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 PRAMEF11O60813 436 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 PAK4O96013 591 aaPredicted RBP6.48□□□□□ -1.37
CCL1-201ENST00000225842 APOC2P02655 101 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 FGF3P11487 239 aaPredicted RBP6.48□□□□□ -1.37
CCL1-201ENST00000225842 ENO3P13929 434 aaPredicted RBP6.48□□□□□ -1.37
CCL1-201ENST00000225842 CHRNA3P32297 505 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 PTGER4P35408 488 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 CSNK1DP48730 415 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 CDH12P55289 794 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 DPYSL3Q14195 570 aa6.48□□□□□ -1.37
CCL1-201ENST00000225842 PAFAH1B3Q15102 231 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms