RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 SERHL2Q9H4I8 314 aa17.53■□□□□ 0.4
CACTIN-201ENST00000221899 KCNK12Q9HB15 430 aa17.53■□□□□ 0.4
CACTIN-201ENST00000221899 HMX1Q9NP08 348 aaPredicted RBP17.53■□□□□ 0.4
CACTIN-201ENST00000221899 TMEM98Q9Y2Y6 226 aa17.53■□□□□ 0.4
CACTIN-201ENST00000221899 DNMT3AQ9Y6K1 912 aaPredicted RBP17.53■□□□□ 0.4
CACTIN-201ENST00000221899 KPNA3O00505 521 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 RAB36O95755 333 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 MMP11P24347 488 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 GPC1P35052 558 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 MMP12P39900 470 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 KCNJ5P48544 419 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 CNTN1Q12860 1018 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ASAH1Q13510 395 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 CRTC2Q53ET0 693 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 PAMR1Q6UXH9 720 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 TM9SF4Q92544 642 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ZNF582Q96NG8 517 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ICKQ9UPZ9 632 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 FEZF1A0PJY2 475 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 TBX6O95947 436 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 KIR2DL3P43628 341 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 OCLNQ16625 522 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ZNF658BQ4V348 819 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 GPAT3Q53EU6 434 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ZNF805Q5CZA5 627 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 CCDC149Q6ZUS6 474 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 IKBIPQ70UQ0 350 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 PARS2Q7L3T8 475 aaKnown RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ZER1Q7Z7L7 766 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ATP6V1C2Q8NEY4 427 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 TM4SF18Q96CE8 201 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ZNF689Q96CS4 500 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 RNF170Q96K19 258 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 TEFMQ96QE5 360 aaKnown RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 TREX2Q9BQ50 279 aaPredicted RBP17.52■□□□□ 0.4
CACTIN-201ENST00000221899 COMMD3Q9UBI1 195 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 TRPC4Q9UBN4 977 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 A4GNTQ9UNA3 340 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 ASF1AQ9Y294 204 aa17.52■□□□□ 0.4
CACTIN-201ENST00000221899 PRAMEF27A3QJZ7 478 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 WASHC1A8K0Z3 465 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SCO2O43819 266 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 IL1AP01583 271 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 EPHX1P07099 455 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 C8AP07357 584 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 XKRXQ6PP77 449 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 WASH2PQ6VEQ5 465 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 FAM92BQ6ZTR7 304 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 ZNF438Q7Z4V0 828 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 NOXA1Q86UR1 476 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 LAPTM4BQ86VI4 370 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 OR4K5Q8NGD3 323 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 OR5AR1Q8NGP9 310 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 OR5P2Q8WZ92 322 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 IRF7Q92985 503 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SIRT3Q9NTG7 399 aaPredicted RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 DIMT1Q9UNQ2 313 aaKnown RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 PLA2G10O15496 165 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 MMP20O60882 483 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SYN1P17600 705 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 CD79BP40259 229 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SNAPC1Q16533 368 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 DDI2Q5TDH0 399 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 RAET1GQ6H3X3 334 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 TYW3Q6IPR3 259 aaKnown RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 VWA5B2Q8N398 1253 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 OR52P1PQ8NH57 321 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 MSLNLQ96KJ4 702 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 MRGPRX3Q96LB0 322 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 FRMD6Q96NE9 622 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 YIPF4Q9BSR8 244 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 FNDC11Q9BVV2 318 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 ZNF717Q9BY31 904 aaPredicted RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 PLA2G12AQ9BZM1 189 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 EGLN3Q9H6Z9 239 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 CUEDC1Q9NWM3 386 aaPredicted RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 TAC3Q9UHF0 121 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 NDRG2Q9UN36 371 aaKnown RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 LILRB5O75023 590 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 ALDH1A1P00352 501 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SOD1P00441 154 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 CPEP16870 476 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 APEX1P27695 318 aaKnown RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 MAPK9P45984 424 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SLC35F1Q5T1Q4 408 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 PDZD3Q86UT5 571 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 ANKRD53Q8N9V6 530 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 ENKURQ8TC29 256 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SMPDL3AQ92484 453 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 SLC9A6Q92581 669 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 KCTD7Q96MP8 289 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 ZNF607Q96SK3 696 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 KATNB1Q9BVA0 655 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 PRR14Q9BWN1 585 aa17.51■□□□□ 0.39
CACTIN-201ENST00000221899 TEX10Q9NXF1 929 aaPredicted RBP17.51■□□□□ 0.39
CACTIN-201ENST00000221899 DENND4CQ5VZ89 1909 aa17.5■□□□□ 0.39
CACTIN-201ENST00000221899 POP7O75817 140 aaKnown RBP17.5■□□□□ 0.39
CACTIN-201ENST00000221899 PDE9AO76083 593 aa17.5■□□□□ 0.39
CACTIN-201ENST00000221899 NTN1O95631 604 aa17.5■□□□□ 0.39
CACTIN-201ENST00000221899 MYL12AP19105 171 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms