RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 DGCR6Q14129 220 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 SMN1Q16637 294 aaKnown RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 FAM71E1Q6IPT2 247 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 DCDC5Q6ZRR9 648 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 AHSA2Q719I0 299 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 CCDC80Q76M96 950 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHGA-201ENST00000216492 ENTHD1Q8IYW4 607 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 OR10G2Q8NGC3 310 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 CHPT1Q8WUD6 406 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 VMP1Q96GC9 406 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 SH3YL1Q96HL8 342 aaPredicted RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 THSD1Q9NS62 852 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 ANGPT4Q9Y264 503 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 ERGIC3Q9Y282 383 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 NUP214P35658 2090 aaPredicted RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 LRIT2A6NDA9 550 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 A8MVJ9 347 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 RTCAO00442 366 aaKnown RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 ZW10O43264 779 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 AQP9O43315 295 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 LAMTOR5O43504 91 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 WBP4O75554 376 aaKnown RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 OPN1SWP03999 348 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 UGT2B7P16662 529 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 AHRP35869 848 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 GGT2P36268 569 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 OPRL1P41146 370 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 MLLT10P55197 1068 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 CDK6Q00534 326 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 PAGE2Q7Z2X7 111 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 ZNF761Q86XN6 746 aaPredicted RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 CCDC71Q8IV32 467 aaPredicted RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 NFKBIDQ8NI38 313 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 GEMIN6Q8WXD5 167 aaKnown RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 MYDGFQ969H8 173 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 CIDECQ96AQ7 238 aaPredicted RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 RGMAQ96B86 450 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 ZNF300Q96RE9 604 aaPredicted RBP16.04■□□□□ 0.16
CHGA-201ENST00000216492 FEVQ99581 238 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 MIEF1Q9NQG6 463 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 GPATCH2Q9NW75 528 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 PCDHGA6Q9Y5G7 932 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 CORINQ9Y5Q5 1042 aa16.04■□□□□ 0.16
CHGA-201ENST00000216492 SDK1Q7Z5N4 2213 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 A0A1W2PRB8 838 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 C2orf74A8MZ97 194 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 TMEM229AB2RXF0 380 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 TPP2P29144 1249 aaPredicted RBP16.03■□□□□ 0.16
CHGA-201ENST00000216492 BSGP35613 385 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ADCK1Q86TW2 530 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 PAQR7Q86WK9 346 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 DEPDC4Q8N2C3 294 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 CENPSQ8N2Z9 138 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 SNRNP27Q8WVK2 155 aaKnown RBP16.03■□□□□ 0.16
CHGA-201ENST00000216492 APH1BQ8WW43 257 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 KCNC2Q96PR1 638 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 MACROD1Q9BQ69 325 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ZNF717Q9BY31 904 aaPredicted RBP16.03■□□□□ 0.16
CHGA-201ENST00000216492 ZNF556Q9HAH1 456 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ENOPH1Q9UHY7 261 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 RNF6Q9Y252 685 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 LRP4O75096 1905 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 TNFSF14O43557 240 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 MAGP20916 626 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 SOAT1P35610 550 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 CDH12P55289 794 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 MAZP56270 477 aaKnown RBP16.03■□□□□ 0.16
CHGA-201ENST00000216492 MC1RQ01726 317 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ITGADQ13349 1161 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ZIC1Q15915 447 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 MICAQ29983 383 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ADPRMQ3LIE5 342 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 CRB2Q5IJ48 1285 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 FBXO42Q6P3S6 717 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 RNF130Q86XS8 419 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 ARL14Q8N4G2 192 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 MFSD9Q8NBP5 474 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 TAMM41Q96BW9 452 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 QRFPRQ96P65 431 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 COPS4Q9BT78 406 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 C1GALT1Q9NS00 363 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 PLCXD1Q9NUJ7 323 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 DNAAF2Q9NVR5 837 aaKnown RBP16.03■□□□□ 0.16
CHGA-201ENST00000216492 FAM32AQ9Y421 112 aaKnown RBP16.03■□□□□ 0.16
CHGA-201ENST00000216492 MAP4K5Q9Y4K4 846 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 PCDHGA4Q9Y5G9 962 aa16.03■□□□□ 0.16
CHGA-201ENST00000216492 OR2A25A4D2G3 310 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 PPM1DO15297 605 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 CAPN5O15484 640 aaPredicted RBP16.02■□□□□ 0.15
CHGA-201ENST00000216492 NDUFS4O43181 175 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 SDC3O75056 442 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 SULT1C4O75897 302 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 DDX5P17844 614 aaKnown RBP16.02■□□□□ 0.15
CHGA-201ENST00000216492 CASP9P55211 416 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 TEKQ02763 1124 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 ATP1A4Q13733 1029 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 TMEM35AQ53FP2 167 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 TJAP1Q5JTD0 557 aa16.02■□□□□ 0.15
CHGA-201ENST00000216492 UBE2UQ5VVX9 321 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms