RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 HDAC2Q92769 488 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 HSPA12BQ96MM6 686 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 GRIP2Q9C0E4 1043 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 IL21RQ9HBE5 538 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 KCND3Q9UK17 655 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SPACA6W5XKT8 324 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ARRDC5A6NEK1 342 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SLC28A2O43868 658 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SRPX2O60687 465 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SLITRK5O94991 958 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 IFNW1P05000 195 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 C8orf89P0DMQ9 161 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ST6GAL1P15907 406 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 TYRP1P17643 537 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 TNFRSF1BP20333 461 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 CAPZBP47756 277 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 MAN2A2P49641 1150 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 CRISP3P54108 245 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ISL1P61371 349 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 PUM1Q14671 1186 aaKnown RBP eCLIP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 TMEM107Q6UX40 140 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF438Q7Z4V0 828 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 KRT73Q86Y46 540 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 DNAJC22Q8N4W6 341 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SMYD1Q8NB12 490 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 OR9A2Q8NGT5 310 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 XAGE5Q8WWM1 108 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 SPATA5L1Q9BVQ7 753 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 BTBD2Q9BX70 525 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 CHRNA10Q9GZZ6 450 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 RAB33BQ9H082 229 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 DOLKQ9UPQ8 538 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 LIPT1Q9Y234 373 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 FAM32AQ9Y421 112 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 PCDHGA8Q9Y5G5 932 aa13.47□□□□□ -0.25
RTFDC1-201ENST00000023939 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 A0A0G2JPF8 293 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 A0A1W2PS29 197 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 VGLL3A8MV65 326 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 HNRNPCL2B2RXH8 293 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 HNRNPCL3B7ZW38 293 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 CYR61O00622 381 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 AQP9O43315 295 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 MITFO75030 526 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 PROS1P07225 676 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 FESP07332 822 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 HNRNPCL4P0DMR1 293 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 NR2F1P10589 423 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 ANXA8P13928 327 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 HOXA6P31267 233 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 MC3RP41968 323 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 OR1E2P47887 323 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 XKP51811 444 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 TOP3AQ13472 1001 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 LASP1Q14847 261 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 LAPTM4AQ15012 233 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 SYPL1Q16563 259 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 MICAQ29983 383 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 ATG16L2Q8NAA4 619 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 SETD9Q8NE22 299 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 NUP43Q8NFH3 380 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 OR5D16Q8NGK9 328 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 PROX1Q92786 737 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 DGCR14Q96DF8 476 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 GIMAP5Q96F15 307 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 TCTN2Q96GX1 697 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 DHRS1Q96LJ7 313 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF354BQ96LW1 612 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 CSF3RQ99062 836 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 PITX2Q99697 317 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 CCDC3Q9BQI4 270 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 RSPO3Q9BXY4 272 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 GABARAPL3Q9BY60 117 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 RBM38Q9H0Z9 239 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 ING2Q9H160 280 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 MIR1-1HGQ9H1L0 117 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 FAM60AQ9NP50 221 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 KRT84Q9NSB2 600 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 ACER3Q9NUN7 267 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 TRPC4Q9UBN4 977 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 SH3GLB1Q9Y371 365 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 TESMINQ9Y4I5 508 aa13.46□□□□□ -0.25
RTFDC1-201ENST00000023939 EME2A4GXA9 379 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 BCKDKO14874 412 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 DNAJB6O75190 326 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 EIF2S1P05198 315 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 CPMP14384 443 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 CDH3P22223 829 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 EPHA4P54764 986 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 SPIBQ01892 262 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 FUT5Q11128 374 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 NIPAL1Q6NVV3 410 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 SZRD1Q7Z422 152 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 MCATQ8IVS2 390 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms