RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
LINC00339-212ENST00000642072 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
LINC00339-212ENST00000642072 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
LINC00339-212ENST00000642072 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
LINC00339-212ENST00000642072 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
LINC00339-212ENST00000642072 KLRG2A4D1S0 409 aaPredicted RBP11.6□□□□□ -0.55
LINC00339-212ENST00000642072 CC2D1BQ5T0F9 858 aaKnown RBP11.6□□□□□ -0.55
LINC00339-212ENST00000642072 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
LINC00339-212ENST00000642072 PHACTR3Q96KR7 559 aa11.6□□□□□ -0.55
LINC00339-212ENST00000642072 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
LINC00339-212ENST00000642072 ADAMTSL1Q8N6G6 1762 aa11.59□□□□□ -0.55
LINC00339-212ENST00000642072 SOGA3Q5TF21 947 aa11.59□□□□□ -0.55
LINC00339-212ENST00000642072 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
LINC00339-212ENST00000642072 ZNF330Q9Y3S2 320 aaPredicted RBP11.59□□□□□ -0.55
LINC00339-212ENST00000642072 SNED1Q8TER0 1413 aa11.59□□□□□ -0.55
LINC00339-212ENST00000642072 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
LINC00339-212ENST00000642072 ITGBL1O95965 494 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-212ENST00000642072 ST5P78524 1137 aa11.58□□□□□ -0.56
LINC00339-212ENST00000642072 CLEC4GQ6UXB4 293 aa11.58□□□□□ -0.56
LINC00339-212ENST00000642072 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
LINC00339-212ENST00000642072 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
LINC00339-212ENST00000642072 USP16Q9Y5T5 823 aa11.58□□□□□ -0.56
LINC00339-212ENST00000642072 SCN4AP35499 1836 aa11.58□□□□□ -0.56
LINC00339-212ENST00000642072 ZNF541Q9H0D2 1346 aa11.58□□□□□ -0.56
LINC00339-212ENST00000642072 IQCA1LA6NCM1 817 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
LINC00339-212ENST00000642072 RGL2O15211 777 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 FOXN1O15353 648 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 PIP4K2AP48426 406 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-212ENST00000642072 NBPF10Q6P3W6 841 aaKnown RBP11.57□□□□□ -0.56
LINC00339-212ENST00000642072 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 NBPF15Q8N660 670 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
LINC00339-212ENST00000642072 BTBD11A6QL63 1104 aa11.56□□□□□ -0.56
LINC00339-212ENST00000642072 CCDC93Q567U6 631 aa11.56□□□□□ -0.56
LINC00339-212ENST00000642072 OLFM4Q6UX06 510 aa11.56□□□□□ -0.56
LINC00339-212ENST00000642072 NPR1P16066 1061 aa11.55□□□□□ -0.56
LINC00339-212ENST00000642072 PRKAR2BP31323 418 aa11.55□□□□□ -0.56
LINC00339-212ENST00000642072 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC00339-212ENST00000642072 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-212ENST00000642072 PRDM10Q9NQV6 1147 aa11.55□□□□□ -0.56
LINC00339-212ENST00000642072 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-212ENST00000642072 FZD9O00144 591 aa11.54□□□□□ -0.56
LINC00339-212ENST00000642072 SNRPA1P09661 255 aaKnown RBP11.54□□□□□ -0.56
LINC00339-212ENST00000642072 VEGFBP49765 207 aa11.54□□□□□ -0.56
LINC00339-212ENST00000642072 COL4A5P29400 1685 aa11.54□□□□□ -0.56
LINC00339-212ENST00000642072 TMEM88BA6NKF7 163 aa11.53□□□□□ -0.56
LINC00339-212ENST00000642072 NPHP1O15259 732 aa11.53□□□□□ -0.56
LINC00339-212ENST00000642072 CRY2Q49AN0 593 aa11.53□□□□□ -0.56
LINC00339-212ENST00000642072 MCM10Q7L590 875 aa11.53□□□□□ -0.56
LINC00339-212ENST00000642072 NPM2Q86SE8 214 aaKnown RBP11.53□□□□□ -0.56
LINC00339-212ENST00000642072 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
LINC00339-212ENST00000642072 ZNF652Q9Y2D9 606 aa11.53□□□□□ -0.56
LINC00339-212ENST00000642072 RASSF10A6NK89 507 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 EPHX2P34913 555 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 HLFQ16534 295 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 HACL1Q9UJ83 578 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 NIP7Q9Y221 180 aaKnown RBP eCLIP11.52□□□□□ -0.57
LINC00339-212ENST00000642072 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 ABCC12Q96J65 1359 aa11.52□□□□□ -0.57
LINC00339-212ENST00000642072 IARSP41252 1262 aaKnown RBP11.51□□□□□ -0.57
LINC00339-212ENST00000642072 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-212ENST00000642072 GPC2Q8N158 579 aa11.51□□□□□ -0.57
LINC00339-212ENST00000642072 CCER1Q8TC90 406 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-212ENST00000642072 PSMD1Q99460 953 aa11.51□□□□□ -0.57
LINC00339-212ENST00000642072 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
LINC00339-212ENST00000642072 THSD7BQ9C0I4 1608 aa11.5□□□□□ -0.57
LINC00339-212ENST00000642072 DCTN1Q14203 1278 aa11.5□□□□□ -0.57
LINC00339-212ENST00000642072 EAPPQ56P03 285 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-212ENST00000642072 MAP1SQ66K74 1059 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-212ENST00000642072 PNMA8AQ86V59 439 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-212ENST00000642072 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
LINC00339-212ENST00000642072 RIC1Q4ADV7 1423 aa11.5□□□□□ -0.57
LINC00339-212ENST00000642072 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
LINC00339-212ENST00000642072 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
LINC00339-212ENST00000642072 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
LINC00339-212ENST00000642072 HOXA10P31260 410 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-212ENST00000642072 SLC51AQ86UW1 340 aa11.49□□□□□ -0.57
LINC00339-212ENST00000642072 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
LINC00339-212ENST00000642072 FAM177BA6PVY3 158 aa11.48□□□□□ -0.57
LINC00339-212ENST00000642072 HSPA8P11142 646 aaKnown RBP11.48□□□□□ -0.57
LINC00339-212ENST00000642072 LBX1P52954 281 aa11.48□□□□□ -0.57
LINC00339-212ENST00000642072 CNGB1Q14028 1251 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-212ENST00000642072 CFAP53Q96M91 514 aa11.48□□□□□ -0.57
LINC00339-212ENST00000642072 IBTKQ9P2D0 1353 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-212ENST00000642072 KDM3BQ7LBC6 1761 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 U2AF1L5P0DN76 240 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-212ENST00000642072 PPP2R1AP30153 589 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 SCNN1DP51172 638 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 U2AF1Q01081 240 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00339-212ENST00000642072 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
LINC00339-212ENST00000642072 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
LINC00339-212ENST00000642072 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
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