RNA–Protein interactions for RNA: ENST00000641536.1

CCDC196-209, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,483 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-209ENST00000641536 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
CCDC196-209ENST00000641536 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
CCDC196-209ENST00000641536 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
CCDC196-209ENST00000641536 SLC52A2Q9HAB3 445 aa9.41□□□□□ -0.9
CCDC196-209ENST00000641536 ZBTB1Q9Y2K1 713 aa9.41□□□□□ -0.9
CCDC196-209ENST00000641536 BCORQ6W2J9 1755 aa9.41□□□□□ -0.9
CCDC196-209ENST00000641536 FCHSD2O94868 740 aa9.4□□□□□ -0.9
CCDC196-209ENST00000641536 HMGB2P26583 209 aaKnown RBP9.4□□□□□ -0.9
CCDC196-209ENST00000641536 USPL1Q5W0Q7 1092 aa9.4□□□□□ -0.9
CCDC196-209ENST00000641536 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.9
CCDC196-209ENST00000641536 PARP3Q9Y6F1 533 aa9.4□□□□□ -0.9
CCDC196-209ENST00000641536 CARMIL3Q8ND23 1372 aa9.4□□□□□ -0.9
CCDC196-209ENST00000641536 DIAPH1O60610 1272 aaKnown RBP9.4□□□□□ -0.91
CCDC196-209ENST00000641536 KCNA3P22001 575 aa9.4□□□□□ -0.91
CCDC196-209ENST00000641536 ARHGAP27Q6ZUM4 889 aa9.4□□□□□ -0.91
CCDC196-209ENST00000641536 NLGN1Q8N2Q7 840 aa9.4□□□□□ -0.91
CCDC196-209ENST00000641536 CCDC87Q9NVE4 849 aa9.4□□□□□ -0.91
CCDC196-209ENST00000641536 COL15A1P39059 1388 aa9.39□□□□□ -0.91
CCDC196-209ENST00000641536 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
CCDC196-209ENST00000641536 CYP19A1P11511 503 aaPredicted RBP9.39□□□□□ -0.91
CCDC196-209ENST00000641536 CCDC24Q8N4L8 307 aa9.39□□□□□ -0.91
CCDC196-209ENST00000641536 POLRMTO00411 1230 aaKnown RBP9.38□□□□□ -0.91
CCDC196-209ENST00000641536 KIF3CO14782 793 aa9.38□□□□□ -0.91
CCDC196-209ENST00000641536 KCNQ3O43525 872 aa9.38□□□□□ -0.91
CCDC196-209ENST00000641536 CANXP27824 592 aaKnown RBP9.38□□□□□ -0.91
CCDC196-209ENST00000641536 PIP4K2AP48426 406 aaPredicted RBP9.38□□□□□ -0.91
CCDC196-209ENST00000641536 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
CCDC196-209ENST00000641536 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
CCDC196-209ENST00000641536 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
CCDC196-209ENST00000641536 NMRK2Q9NPI5 230 aa9.38□□□□□ -0.91
CCDC196-209ENST00000641536 ZNF330Q9Y3S2 320 aaPredicted RBP9.38□□□□□ -0.91
CCDC196-209ENST00000641536 WDR90Q96KV7 1748 aa9.37□□□□□ -0.91
CCDC196-209ENST00000641536 DICER1Q9UPY3 1922 aaKnown RBP9.37□□□□□ -0.91
CCDC196-209ENST00000641536 TGFB2P61812 414 aa9.37□□□□□ -0.91
CCDC196-209ENST00000641536 RASSF7Q02833 373 aa9.37□□□□□ -0.91
CCDC196-209ENST00000641536 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
CCDC196-209ENST00000641536 PHACTR3Q96KR7 559 aa9.37□□□□□ -0.91
CCDC196-209ENST00000641536 RYDENQ9NUL5 291 aaKnown RBP9.37□□□□□ -0.91
CCDC196-209ENST00000641536 SLX4Q8IY92 1834 aa9.37□□□□□ -0.91
CCDC196-209ENST00000641536 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
CCDC196-209ENST00000641536 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
CCDC196-209ENST00000641536 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
CCDC196-209ENST00000641536 NFIXQ14938 502 aa9.36□□□□□ -0.91
CCDC196-209ENST00000641536 C9orf131Q5VYM1 1079 aa9.36□□□□□ -0.91
CCDC196-209ENST00000641536 IL17REQ8NFR9 667 aa9.36□□□□□ -0.91
CCDC196-209ENST00000641536 ZNF496Q96IT1 587 aaPredicted RBP9.36□□□□□ -0.91
CCDC196-209ENST00000641536 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
CCDC196-209ENST00000641536 ZPR1O75312 459 aa9.35□□□□□ -0.91
CCDC196-209ENST00000641536 TM4SF1P30408 202 aa9.35□□□□□ -0.91
CCDC196-209ENST00000641536 PRKAR2BP31323 418 aa9.35□□□□□ -0.91
CCDC196-209ENST00000641536 HTRA3P83110 453 aa9.35□□□□□ -0.91
CCDC196-209ENST00000641536 KDM3BQ7LBC6 1761 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 ARFGEF2Q9Y6D5 1785 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 PRELPP51888 382 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 DCTN1Q14203 1278 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 PIM2Q9P1W9 311 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 HEG1Q9ULI3 1381 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 NUP98P52948 1817 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 A1BGP04217 495 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 HSPA6P17066 643 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 TIE1P35590 1138 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 DALRD3Q5D0E6 543 aaKnown RBP9.34□□□□□ -0.91
CCDC196-209ENST00000641536 TBC1D9BQ66K14 1250 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 MCM10Q7L590 875 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 RNF181Q9P0P0 153 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 NARFQ9UHQ1 456 aa9.34□□□□□ -0.91
CCDC196-209ENST00000641536 GALR2O43603 387 aaPredicted RBP9.33□□□□□ -0.92
CCDC196-209ENST00000641536 SERPINB2P05120 415 aa9.33□□□□□ -0.92
CCDC196-209ENST00000641536 TEFQ10587 303 aa9.33□□□□□ -0.92
CCDC196-209ENST00000641536 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
CCDC196-209ENST00000641536 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
CCDC196-209ENST00000641536 NPC1L1Q9UHC9 1359 aa9.32□□□□□ -0.92
CCDC196-209ENST00000641536 GTPBP6O43824 516 aaPredicted RBP9.32□□□□□ -0.92
CCDC196-209ENST00000641536 PPP2R1AP30153 589 aa9.32□□□□□ -0.92
CCDC196-209ENST00000641536 GAS2L2Q8NHY3 880 aa9.32□□□□□ -0.92
CCDC196-209ENST00000641536 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
CCDC196-209ENST00000641536 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
CCDC196-209ENST00000641536 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CCDC196-209ENST00000641536 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
CCDC196-209ENST00000641536 GOLGA2Q08379 1002 aa9.31□□□□□ -0.92
CCDC196-209ENST00000641536 C2CD5Q86YS7 1000 aa9.31□□□□□ -0.92
CCDC196-209ENST00000641536 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
CCDC196-209ENST00000641536 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
CCDC196-209ENST00000641536 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
CCDC196-209ENST00000641536 MIS18AQ9NYP9 233 aa9.3□□□□□ -0.92
CCDC196-209ENST00000641536 USP16Q9Y5T5 823 aa9.3□□□□□ -0.92
CCDC196-209ENST00000641536 NFKBIEO00221 500 aa9.29□□□□□ -0.92
CCDC196-209ENST00000641536 STARD3NLO95772 234 aa9.29□□□□□ -0.92
CCDC196-209ENST00000641536 MMRN1Q13201 1228 aa9.29□□□□□ -0.92
CCDC196-209ENST00000641536 PRR5LQ6MZQ0 368 aa9.29□□□□□ -0.92
CCDC196-209ENST00000641536 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
CCDC196-209ENST00000641536 TAF1P21675 1872 aa9.29□□□□□ -0.92
CCDC196-209ENST00000641536 FAM177BA6PVY3 158 aa9.28□□□□□ -0.92
CCDC196-209ENST00000641536 CAMTA2O94983 1202 aa9.28□□□□□ -0.92
CCDC196-209ENST00000641536 SLC51AQ86UW1 340 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms