RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
CASC19-230ENST00000641421 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
CASC19-230ENST00000641421 UBR2Q8IWV8 1755 aa13.06□□□□□ -0.32
CASC19-230ENST00000641421 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
CASC19-230ENST00000641421 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
CASC19-230ENST00000641421 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
CASC19-230ENST00000641421 KAZALD1Q96I82 304 aa13.06□□□□□ -0.32
CASC19-230ENST00000641421 ANTXR1Q9H6X2 564 aa13.06□□□□□ -0.32
CASC19-230ENST00000641421 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
CASC19-230ENST00000641421 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
CASC19-230ENST00000641421 NBPF14Q5TI25 921 aa13.05□□□□□ -0.32
CASC19-230ENST00000641421 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
CASC19-230ENST00000641421 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
CASC19-230ENST00000641421 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
CASC19-230ENST00000641421 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
CASC19-230ENST00000641421 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
CASC19-230ENST00000641421 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
CASC19-230ENST00000641421 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
CASC19-230ENST00000641421 USP42Q9H9J4 1324 aaKnown RBP13.04□□□□□ -0.32
CASC19-230ENST00000641421 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
CASC19-230ENST00000641421 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
CASC19-230ENST00000641421 A1BGP04217 495 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 CHMLP26374 656 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 RABEP1Q15276 862 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
CASC19-230ENST00000641421 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 ESYT1Q9BSJ8 1104 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 ARFGEF2Q9Y6D5 1785 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 ATP5J2-PTCD1G3V325 749 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
CASC19-230ENST00000641421 COL15A1P39059 1388 aa13.02□□□□□ -0.32
CASC19-230ENST00000641421 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
CASC19-230ENST00000641421 TTLL7Q6ZT98 887 aa13.02□□□□□ -0.33
CASC19-230ENST00000641421 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
CASC19-230ENST00000641421 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
CASC19-230ENST00000641421 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
CASC19-230ENST00000641421 TEX13AQ9BXU3 409 aaPredicted RBP13.02□□□□□ -0.33
CASC19-230ENST00000641421 AFDNP55196 1824 aaKnown RBP13.01□□□□□ -0.33
CASC19-230ENST00000641421 A0A087WZG4 1122 aa13.01□□□□□ -0.33
CASC19-230ENST00000641421 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
CASC19-230ENST00000641421 IFIT2P09913 472 aaKnown RBP13.01□□□□□ -0.33
CASC19-230ENST00000641421 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
CASC19-230ENST00000641421 CNTROBQ8N137 903 aa13.01□□□□□ -0.33
CASC19-230ENST00000641421 PIGBQ92521 554 aa13.01□□□□□ -0.33
CASC19-230ENST00000641421 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
CASC19-230ENST00000641421 CHMP5Q9NZZ3 219 aa13.01□□□□□ -0.33
CASC19-230ENST00000641421 PLCH1Q4KWH8 1693 aa13.01□□□□□ -0.33
CASC19-230ENST00000641421 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
CASC19-230ENST00000641421 EXOC5O00471 708 aa13□□□□□ -0.33
CASC19-230ENST00000641421 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
CASC19-230ENST00000641421 AACSQ86V21 672 aa13□□□□□ -0.33
CASC19-230ENST00000641421 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
CASC19-230ENST00000641421 ECHDC1Q9NTX5 307 aa13□□□□□ -0.33
CASC19-230ENST00000641421 ASAP1Q9ULH1 1129 aa13□□□□□ -0.33
CASC19-230ENST00000641421 PHLPP1O60346 1717 aa13□□□□□ -0.33
CASC19-230ENST00000641421 SASH1O94885 1247 aa12.99□□□□□ -0.33
CASC19-230ENST00000641421 CD2BP2O95400 341 aaKnown RBP12.99□□□□□ -0.33
CASC19-230ENST00000641421 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
CASC19-230ENST00000641421 MCCP23508 829 aa12.99□□□□□ -0.33
CASC19-230ENST00000641421 CASP7P55210 303 aa12.99□□□□□ -0.33
CASC19-230ENST00000641421 SIL1Q9H173 461 aa12.99□□□□□ -0.33
CASC19-230ENST00000641421 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
CASC19-230ENST00000641421 CWC25Q9NXE8 425 aaPredicted RBP12.99□□□□□ -0.33
CASC19-230ENST00000641421 LRP6O75581 1613 aa12.99□□□□□ -0.33
CASC19-230ENST00000641421 H7C1W4 665 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 ADAMTS2O95450 1211 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 RABL6Q3YEC7 729 aaPredicted RBP12.98□□□□□ -0.33
CASC19-230ENST00000641421 DNAJC10Q8IXB1 793 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
CASC19-230ENST00000641421 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 STARD3NLO95772 234 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
CASC19-230ENST00000641421 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
CASC19-230ENST00000641421 BCL9O00512 1426 aa12.97□□□□□ -0.33
CASC19-230ENST00000641421 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
CASC19-230ENST00000641421 HSP90AA1P07900 732 aaKnown RBP12.97□□□□□ -0.33
CASC19-230ENST00000641421 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
CASC19-230ENST00000641421 KLHDC4Q8TBB5 520 aa12.97□□□□□ -0.33
CASC19-230ENST00000641421 EAF2Q96CJ1 260 aaPredicted RBP12.97□□□□□ -0.33
CASC19-230ENST00000641421 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
CASC19-230ENST00000641421 ITGB4P16144 1822 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 WNK3Q9BYP7 1800 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 SPATA31A1Q5TZJ5 1347 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 ST18O60284 1047 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 TOM1O60784 492 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 DDIT3P35638 169 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
CASC19-230ENST00000641421 KIF6Q6ZMV9 814 aa12.96□□□□□ -0.33
CASC19-230ENST00000641421 CCDC8Q9H0W5 538 aaPredicted RBP12.96□□□□□ -0.33
CASC19-230ENST00000641421 THRAP3Q9Y2W1 955 aaKnown RBP12.96□□□□□ -0.33
CASC19-230ENST00000641421 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
CASC19-230ENST00000641421 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
CASC19-230ENST00000641421 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
CASC19-230ENST00000641421 ANAPC15P60006 121 aa12.95□□□□□ -0.34
CASC19-230ENST00000641421 FOXO4P98177 505 aa12.95□□□□□ -0.34
CASC19-230ENST00000641421 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms