RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1
PHGDH-208ENST00000641023 SPATA31A5Q5VU36 1347 aa21.33■■□□□ 1
PHGDH-208ENST00000641023 SPATA31A7Q8IWB4 1347 aa21.33■■□□□ 1
PHGDH-208ENST00000641023 SLIT2O94813 1529 aa21.32■■□□□ 1
PHGDH-208ENST00000641023 C22orf23Q9BZE7 217 aa21.32■■□□□ 1
PHGDH-208ENST00000641023 BCL9O00512 1426 aa21.32■■□□□ 1
PHGDH-208ENST00000641023 TBC1D9Q6ZT07 1266 aa21.32■■□□□ 1
PHGDH-208ENST00000641023 KIF1BPQ96EK5 621 aa21.32■■□□□ 1
PHGDH-208ENST00000641023 WNK3Q9BYP7 1800 aa21.31■■□□□ 1
PHGDH-208ENST00000641023 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
PHGDH-208ENST00000641023 SUCLG2Q96I99 432 aa21.31■■□□□ 1
PHGDH-208ENST00000641023 JCADQ9P266 1359 aa21.31■■□□□ 1
PHGDH-208ENST00000641023 NWD2Q9ULI1 1742 aa21.31■■□□□ 1
PHGDH-208ENST00000641023 STARD3NLO95772 234 aa21.3■■□□□ 1
PHGDH-208ENST00000641023 MX1P20591 662 aa21.3■■□□□ 1
PHGDH-208ENST00000641023 BARGINQ6ZT62 677 aa21.3■■□□□ 1
PHGDH-208ENST00000641023 RHPN1Q8TCX5 695 aa21.3■■□□□ 1
PHGDH-208ENST00000641023 RBM42Q9BTD8 480 aaKnown RBP21.3■■□□□ 1
PHGDH-208ENST00000641023 BICC1Q9H694 974 aaKnown RBP21.3■■□□□ 1
PHGDH-208ENST00000641023 SALL3Q9BXA9 1300 aa21.29■■□□□ 1
PHGDH-208ENST00000641023 KAZALD1Q96I82 304 aa21.29■■□□□ 1
PHGDH-208ENST00000641023 ITGB4P16144 1822 aa21.29■■□□□ 1
PHGDH-208ENST00000641023 UNC5CLQ8IV45 518 aa21.28■■□□□ 1
PHGDH-208ENST00000641023 SDSP20132 328 aa21.28■■□□□ 1
PHGDH-208ENST00000641023 OS9Q13438 667 aaPredicted RBP21.28■■□□□ 1
PHGDH-208ENST00000641023 CASC1Q6TDU7 716 aa21.28■■□□□ 1
PHGDH-208ENST00000641023 TTLL7Q6ZT98 887 aa21.28■■□□□ 1
PHGDH-208ENST00000641023 IL1RAPL2Q9NP60 686 aa21.28■■□□□ 1
PHGDH-208ENST00000641023 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
PHGDH-208ENST00000641023 PRIM1P49642 420 aaKnown RBP21.27■■□□□ 1
PHGDH-208ENST00000641023 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
PHGDH-208ENST00000641023 ERC1Q8IUD2 1116 aa21.27■□□□□ 0.99
PHGDH-208ENST00000641023 NGLY1Q96IV0 654 aa21.27■□□□□ 0.99
PHGDH-208ENST00000641023 STAP2Q9UGK3 403 aa21.27■□□□□ 0.99
PHGDH-208ENST00000641023 ARFGEF2Q9Y6D5 1785 aa21.27■□□□□ 0.99
PHGDH-208ENST00000641023 A0A087WZG4 1122 aa21.26■□□□□ 0.99
PHGDH-208ENST00000641023 BECN1Q14457 450 aa21.26■□□□□ 0.99
PHGDH-208ENST00000641023 C8orf37Q96NL8 207 aa21.25■□□□□ 0.99
PHGDH-208ENST00000641023 AOX1Q06278 1338 aa21.24■□□□□ 0.99
PHGDH-208ENST00000641023 RBM25P49756 843 aaKnown RBP21.24■□□□□ 0.99
PHGDH-208ENST00000641023 UBE3BQ7Z3V4 1068 aa21.24■□□□□ 0.99
PHGDH-208ENST00000641023 ANP32EQ9BTT0 268 aa21.24■□□□□ 0.99
PHGDH-208ENST00000641023 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
PHGDH-208ENST00000641023 COL15A1P39059 1388 aa21.24■□□□□ 0.99
PHGDH-208ENST00000641023 ZBTB3Q9H5J0 574 aa21.24■□□□□ 0.99
PHGDH-208ENST00000641023 CLASRPQ8N2M8 674 aaKnown RBP21.23■□□□□ 0.99
PHGDH-208ENST00000641023 CWC25Q9NXE8 425 aaPredicted RBP21.23■□□□□ 0.99
PHGDH-208ENST00000641023 SPATA31A6Q5VVP1 1343 aa21.23■□□□□ 0.99
PHGDH-208ENST00000641023 G3BP1Q13283 466 aaKnown RBP eCLIP21.22■□□□□ 0.999e-7■■■□□ 18.4
PHGDH-208ENST00000641023 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-208ENST00000641023 CCDC191Q8NCU4 936 aa21.22■□□□□ 0.99
PHGDH-208ENST00000641023 ZNF330Q9Y3S2 320 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-208ENST00000641023 SLC4A3P48751 1232 aa21.22■□□□□ 0.99
PHGDH-208ENST00000641023 VPS72Q15906 364 aa21.22■□□□□ 0.99
PHGDH-208ENST00000641023 KIF6Q6ZMV9 814 aa21.22■□□□□ 0.99
PHGDH-208ENST00000641023 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-208ENST00000641023 NUTM1Q86Y26 1132 aa21.22■□□□□ 0.99
PHGDH-208ENST00000641023 PA2G4Q9UQ80 394 aaKnown RBP21.22■□□□□ 0.99
PHGDH-208ENST00000641023 TSHZ3Q63HK5 1081 aa21.21■□□□□ 0.99
PHGDH-208ENST00000641023 CERKQ8TCT0 537 aa21.21■□□□□ 0.99
PHGDH-208ENST00000641023 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
PHGDH-208ENST00000641023 H7C1W4 665 aa21.2■□□□□ 0.99
PHGDH-208ENST00000641023 CYP19A1P11511 503 aaPredicted RBP21.2■□□□□ 0.99
PHGDH-208ENST00000641023 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-208ENST00000641023 EPHA10Q5JZY3 1008 aa21.2■□□□□ 0.98
PHGDH-208ENST00000641023 FNBP4Q8N3X1 1017 aaPredicted RBP21.2■□□□□ 0.98
PHGDH-208ENST00000641023 SLC4A9Q96Q91 983 aa21.2■□□□□ 0.98
PHGDH-208ENST00000641023 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
PHGDH-208ENST00000641023 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
PHGDH-208ENST00000641023 A0A0G2JS52 829 aa21.19■□□□□ 0.98
PHGDH-208ENST00000641023 CASP7P55210 303 aa21.19■□□□□ 0.98
PHGDH-208ENST00000641023 JARID2Q92833 1246 aaPredicted RBP21.19■□□□□ 0.98
PHGDH-208ENST00000641023 NUP188Q5SRE5 1749 aa21.19■□□□□ 0.98
PHGDH-208ENST00000641023 TRIM6-TRIM34B2RNG4 842 aa21.19■□□□□ 0.98
PHGDH-208ENST00000641023 FAM98CQ17RN3 349 aaKnown RBP21.19■□□□□ 0.98
PHGDH-208ENST00000641023 ACSBG1Q96GR2 724 aa21.19■□□□□ 0.98
PHGDH-208ENST00000641023 TCIRG1Q13488 830 aa21.18■□□□□ 0.98
PHGDH-208ENST00000641023 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
PHGDH-208ENST00000641023 RILPL2Q969X0 211 aa21.17■□□□□ 0.98
PHGDH-208ENST00000641023 ARXQ96QS3 562 aa21.17■□□□□ 0.98
PHGDH-208ENST00000641023 ISCA1Q9BUE6 129 aa21.17■□□□□ 0.98
PHGDH-208ENST00000641023 COPRSQ9NQ92 184 aa21.17■□□□□ 0.98
PHGDH-208ENST00000641023 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
PHGDH-208ENST00000641023 TRIM28Q13263 835 aaKnown RBP21.16■□□□□ 0.98
PHGDH-208ENST00000641023 REC8O95072 547 aa21.16■□□□□ 0.98
PHGDH-208ENST00000641023 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
PHGDH-208ENST00000641023 SIL1Q9H173 461 aa21.16■□□□□ 0.98
PHGDH-208ENST00000641023 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
PHGDH-208ENST00000641023 USP42Q9H9J4 1324 aaKnown RBP21.15■□□□□ 0.98
PHGDH-208ENST00000641023 ERC2O15083 957 aa21.15■□□□□ 0.98
PHGDH-208ENST00000641023 SASH1O94885 1247 aa21.15■□□□□ 0.98
PHGDH-208ENST00000641023 PI4K2BQ8TCG2 481 aa21.15■□□□□ 0.98
PHGDH-208ENST00000641023 USP21Q9UK80 565 aa21.15■□□□□ 0.98
PHGDH-208ENST00000641023 IL6STP40189 918 aaPredicted RBP21.14■□□□□ 0.98
PHGDH-208ENST00000641023 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.98
PHGDH-208ENST00000641023 GLRX3O76003 335 aaKnown RBP21.14■□□□□ 0.97
PHGDH-208ENST00000641023 HSP90AB3PQ58FF7 597 aa21.14■□□□□ 0.97
PHGDH-208ENST00000641023 LMBR1LQ6UX01 489 aa21.14■□□□□ 0.97
PHGDH-208ENST00000641023 GIGYF2Q6Y7W6 1299 aaKnown RBP21.14■□□□□ 0.97
PHGDH-208ENST00000641023 ATP6V1AP38606 617 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms