RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 NUP98P52948 1817 aa27.53■■■□□ 2
TSPAN9-208ENST00000640568 ARFGEF2Q9Y6D5 1785 aa27.53■■■□□ 2
TSPAN9-208ENST00000640568 BCAR3O75815 825 aa27.52■■■□□ 2
TSPAN9-208ENST00000640568 MAP3K15Q6ZN16 1313 aa27.52■■■□□ 2
TSPAN9-208ENST00000640568 USP42Q9H9J4 1324 aaKnown RBP27.52■■■□□ 2
TSPAN9-208ENST00000640568 PSDA5PKW4 1024 aaPredicted RBP27.51■■■□□ 2
TSPAN9-208ENST00000640568 ZBTB3Q9H5J0 574 aa27.51■■■□□ 2
TSPAN9-208ENST00000640568 BRPF1P55201 1214 aaPredicted RBP27.51■■□□□ 1.99
TSPAN9-208ENST00000640568 USPL1Q5W0Q7 1092 aa27.51■■□□□ 1.99
TSPAN9-208ENST00000640568 ANKRD13DQ6ZTN6 518 aa27.51■■□□□ 1.99
TSPAN9-208ENST00000640568 RIC3Q7Z5B4 369 aa27.51■■□□□ 1.99
TSPAN9-208ENST00000640568 SRP68Q9UHB9 627 aaKnown RBP27.51■■□□□ 1.99
TSPAN9-208ENST00000640568 ZNF652Q9Y2D9 606 aa27.51■■□□□ 1.99
TSPAN9-208ENST00000640568 PTPRCP08575 1304 aa27.5■■□□□ 1.99
TSPAN9-208ENST00000640568 CASZ1Q86V15 1759 aa27.49■■□□□ 1.99
TSPAN9-208ENST00000640568 CAMTA2O94983 1202 aa27.49■■□□□ 1.99
TSPAN9-208ENST00000640568 PLBD2Q8NHP8 589 aa27.49■■□□□ 1.99
TSPAN9-208ENST00000640568 FRAT1Q92837 279 aaPredicted RBP27.49■■□□□ 1.99
TSPAN9-208ENST00000640568 ERVV-1B6SEH8 477 aa27.48■■□□□ 1.99
TSPAN9-208ENST00000640568 NOB1Q9ULX3 412 aaKnown RBP27.48■■□□□ 1.99
TSPAN9-208ENST00000640568 ANKRD36CQ5JPF3 1778 aa27.48■■□□□ 1.99
TSPAN9-208ENST00000640568 IPO8O15397 1037 aaKnown RBP27.46■■□□□ 1.99
TSPAN9-208ENST00000640568 KSR2Q6VAB6 950 aa27.46■■□□□ 1.99
TSPAN9-208ENST00000640568 PI4KAP2A4QPH2 592 aa27.45■■□□□ 1.99
TSPAN9-208ENST00000640568 CENPBP07199 599 aaPredicted RBP27.45■■□□□ 1.99
TSPAN9-208ENST00000640568 PI4KAP1Q8N8J0 262 aa27.45■■□□□ 1.99
TSPAN9-208ENST00000640568 SLC16A10Q8TF71 515 aa27.45■■□□□ 1.99
TSPAN9-208ENST00000640568 GYS1P13807 737 aa27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 HSP90AB3PQ58FF7 597 aa27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 CLEC4GQ6UXB4 293 aa27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 PDGFDQ9GZP0 370 aaPredicted RBP27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 MAP3K2Q9Y2U5 619 aa27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 HLFQ16534 295 aa27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 GIGYF2Q6Y7W6 1299 aaKnown RBP27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 API5Q9BZZ5 524 aaKnown RBP27.44■■□□□ 1.98
TSPAN9-208ENST00000640568 AFDNP55196 1824 aaKnown RBP27.43■■□□□ 1.98
TSPAN9-208ENST00000640568 ADCY9O60503 1353 aa27.43■■□□□ 1.98
TSPAN9-208ENST00000640568 RGL2O15211 777 aa27.43■■□□□ 1.98
TSPAN9-208ENST00000640568 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.43■■□□□ 1.98
TSPAN9-208ENST00000640568 NEXNQ0ZGT2 675 aa27.42■■□□□ 1.98
TSPAN9-208ENST00000640568 ZKSCAN2Q63HK3 967 aa27.42■■□□□ 1.98
TSPAN9-208ENST00000640568 NLGN1Q8N2Q7 840 aa27.42■■□□□ 1.98
TSPAN9-208ENST00000640568 DNAAF4Q8WXU2 420 aa27.42■■□□□ 1.98
TSPAN9-208ENST00000640568 FKBP8Q14318 412 aa27.41■■□□□ 1.98
TSPAN9-208ENST00000640568 MSL1Q68DK7 614 aa27.41■■□□□ 1.98
TSPAN9-208ENST00000640568 ARHGAP45Q92619 1136 aa27.41■■□□□ 1.98
TSPAN9-208ENST00000640568 BCL2L12Q9HB09 334 aa27.41■■□□□ 1.98
TSPAN9-208ENST00000640568 F6X3S4 739 aa27.4■■□□□ 1.98
TSPAN9-208ENST00000640568 MYD88Q99836 296 aa27.4■■□□□ 1.98
TSPAN9-208ENST00000640568 ZBTB7AO95365 584 aa27.39■■□□□ 1.98
TSPAN9-208ENST00000640568 SLC4A10Q6U841 1118 aa27.39■■□□□ 1.98
TSPAN9-208ENST00000640568 ATF7IPQ6VMQ6 1270 aa27.39■■□□□ 1.98
TSPAN9-208ENST00000640568 BICDL1Q6ZP65 573 aa27.39■■□□□ 1.98
TSPAN9-208ENST00000640568 METTL22Q9BUU2 404 aaPredicted RBP27.39■■□□□ 1.98
TSPAN9-208ENST00000640568 TCIRG1Q13488 830 aa27.38■■□□□ 1.97
TSPAN9-208ENST00000640568 MTFR1LQ9H019 292 aa27.38■■□□□ 1.97
TSPAN9-208ENST00000640568 NIP7Q9Y221 180 aaKnown RBP eCLIP27.38■■□□□ 1.97
TSPAN9-208ENST00000640568 ATP10DQ9P241 1426 aa27.38■■□□□ 1.97
TSPAN9-208ENST00000640568 TBC1D9BQ66K14 1250 aa27.38■■□□□ 1.97
TSPAN9-208ENST00000640568 GPTP24298 496 aa27.37■■□□□ 1.97
TSPAN9-208ENST00000640568 SETDB2Q96T68 719 aa27.37■■□□□ 1.97
TSPAN9-208ENST00000640568 PXDNLA1KZ92 1463 aa27.36■■□□□ 1.97
TSPAN9-208ENST00000640568 TRIM27P14373 513 aa27.36■■□□□ 1.97
TSPAN9-208ENST00000640568 FTSJ3Q8IY81 847 aaKnown RBP27.36■■□□□ 1.97
TSPAN9-208ENST00000640568 N4BP2Q86UW6 1770 aaPredicted RBP27.36■■□□□ 1.97
TSPAN9-208ENST00000640568 ATP5J2-PTCD1G3V325 749 aa27.35■■□□□ 1.97
TSPAN9-208ENST00000640568 MS4A1P11836 297 aa27.34■■□□□ 1.97
TSPAN9-208ENST00000640568 NFIXQ14938 502 aa27.34■■□□□ 1.97
TSPAN9-208ENST00000640568 CLUAP1Q96AJ1 413 aa27.34■■□□□ 1.97
TSPAN9-208ENST00000640568 ATF5Q9Y2D1 282 aaPredicted RBP27.34■■□□□ 1.97
TSPAN9-208ENST00000640568 COL24A1Q17RW2 1714 aa27.34■■□□□ 1.97
TSPAN9-208ENST00000640568 ZNF34Q8IZ26 560 aa27.33■■□□□ 1.97
TSPAN9-208ENST00000640568 CARMIL3Q8ND23 1372 aa27.33■■□□□ 1.97
TSPAN9-208ENST00000640568 PLIN1O60240 522 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 POLD1P28340 1107 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 PARP10Q53GL7 1025 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 ISCA1Q9BUE6 129 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 NPHP1O15259 732 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 MMP10P09238 476 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 RRP1P56182 461 aaKnown RBP27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 DZIP1LQ8IYY4 767 aaKnown RBP27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 LINS1Q8NG48 757 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 SRCIN1Q9C0H9 1055 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 PARP3Q9Y6F1 533 aa27.32■■□□□ 1.96
TSPAN9-208ENST00000640568 ABCC4O15439 1325 aa27.31■■□□□ 1.96
TSPAN9-208ENST00000640568 FAM177BA6PVY3 158 aa27.31■■□□□ 1.96
TSPAN9-208ENST00000640568 TM4SF1P30408 202 aa27.31■■□□□ 1.96
TSPAN9-208ENST00000640568 UBN2Q6ZU65 1347 aa27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 CCT4P50991 539 aaKnown RBP27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 CWF19L2Q2TBE0 894 aaKnown RBP27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 BEND3Q5T5X7 828 aa27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 PPP1R42Q7Z4L9 355 aa27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 NLRP10Q86W26 655 aa27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 CCDC191Q8NCU4 936 aa27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 CWC25Q9NXE8 425 aaPredicted RBP27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 TNNQ9UQP3 1299 aa27.3■■□□□ 1.96
TSPAN9-208ENST00000640568 NEURL1BA8MQ27 555 aa27.29■■□□□ 1.96
TSPAN9-208ENST00000640568 IGKV5-2P06315 115 aa27.29■■□□□ 1.96
TSPAN9-208ENST00000640568 TRIM28Q13263 835 aaKnown RBP27.29■■□□□ 1.96
TSPAN9-208ENST00000640568 SUPT16HQ9Y5B9 1047 aaKnown RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms