RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
SCN1B-208ENST00000640135 ACSBG1Q96GR2 724 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
SCN1B-208ENST00000640135 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
SCN1B-208ENST00000640135 CATIPQ7Z7H3 387 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 RANBP6O60518 1105 aaKnown RBP12.92□□□□□ -0.34
SCN1B-208ENST00000640135 CCDC192P0DO97 292 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 MPHOSPH6Q99547 160 aaKnown RBP12.92□□□□□ -0.34
SCN1B-208ENST00000640135 ZHX3Q9H4I2 956 aa12.92□□□□□ -0.34
SCN1B-208ENST00000640135 NIP7Q9Y221 180 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCN1B-208ENST00000640135 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 EYA3Q99504 573 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 BACH2Q9BYV9 841 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 TMEM2Q9UHN6 1383 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 CCDC96Q2M329 555 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 PPP4R3AQ6IN85 833 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 PDCL3Q9H2J4 239 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 PIK3C2GO75747 1445 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 MRE11P49959 708 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
SCN1B-208ENST00000640135 PDILTQ8N807 584 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 CABLES1Q8TDN4 633 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 FEZ1Q99689 392 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 ZFYVE16Q7Z3T8 1539 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 SMC2O95347 1197 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 HOXC9P31274 260 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 CEP57L1Q8IYX8 460 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
SCN1B-208ENST00000640135 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 GRM8O00222 908 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 HMG20BQ9P0W2 317 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
SCN1B-208ENST00000640135 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
SCN1B-208ENST00000640135 DESP17661 470 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
SCN1B-208ENST00000640135 ZNF804AQ7Z570 1209 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 CFAP43Q8NDM7 1665 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
SCN1B-208ENST00000640135 PPP1R12BO60237 982 aaPredicted RBP12.9□□□□□ -0.35
SCN1B-208ENST00000640135 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.35
SCN1B-208ENST00000640135 ZNF592Q92610 1267 aa12.9□□□□□ -0.35
SCN1B-208ENST00000640135 TSPY26PQ9H489 355 aa12.9□□□□□ -0.35
SCN1B-208ENST00000640135 STK32BQ9NY57 414 aa12.9□□□□□ -0.35
SCN1B-208ENST00000640135 SSBP05455 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCN1B-208ENST00000640135 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
SCN1B-208ENST00000640135 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCN1B-208ENST00000640135 IFIT3O14879 490 aaKnown RBP12.89□□□□□ -0.35
SCN1B-208ENST00000640135 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 KIF20AO95235 890 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 TMEM266Q2M3C6 531 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
SCN1B-208ENST00000640135 TRAK2O60296 914 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 PLCG2P16885 1265 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
SCN1B-208ENST00000640135 EYA1Q99502 592 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 ZC3H12CQ9C0D7 883 aaKnown RBP12.88□□□□□ -0.35
SCN1B-208ENST00000640135 CCDC39Q9UFE4 941 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 HOXB7P09629 217 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 MAP3K19Q56UN5 1328 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 MNS1Q8NEH6 495 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 GOLIM4O00461 696 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 NF2P35240 595 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 TMTC2Q8N394 836 aa12.88□□□□□ -0.35
SCN1B-208ENST00000640135 SLC39A6Q13433 755 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 TESK2Q96S53 571 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 ARGLU1Q9NWB6 273 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 NASPP49321 788 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 CCDC194A0A1B0GVG4 234 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 RHPN1Q8TCX5 695 aa12.87□□□□□ -0.35
SCN1B-208ENST00000640135 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
SCN1B-208ENST00000640135 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 TSPY2A6NKD2 308 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
SCN1B-208ENST00000640135 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
SCN1B-208ENST00000640135 C8orf76Q96K31 380 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms