RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 HSH2DQ96JZ2 352 aa10.06□□□□□ -0.8
CCDC7-216ENST00000640058 NEUROD4Q9HD90 331 aa10.06□□□□□ -0.8
CCDC7-216ENST00000640058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.05□□□□□ -0.8
CCDC7-216ENST00000640058 MARSP56192 900 aaKnown RBP10.05□□□□□ -0.8
CCDC7-216ENST00000640058 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
CCDC7-216ENST00000640058 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
CCDC7-216ENST00000640058 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
CCDC7-216ENST00000640058 FAM157BP0CG42 384 aa10.03□□□□□ -0.8
CCDC7-216ENST00000640058 HIRAP54198 1017 aaPredicted RBP10.03□□□□□ -0.8
CCDC7-216ENST00000640058 ALDH16A1Q8IZ83 802 aa10.03□□□□□ -0.8
CCDC7-216ENST00000640058 C7orf43Q8WVR3 580 aa10.03□□□□□ -0.8
CCDC7-216ENST00000640058 CCDC97Q96F63 343 aaPredicted RBP10.03□□□□□ -0.8
CCDC7-216ENST00000640058 C2orf49Q9BVC5 232 aaPredicted RBP10.03□□□□□ -0.8
CCDC7-216ENST00000640058 STRN4Q9NRL3 753 aa10.03□□□□□ -0.8
CCDC7-216ENST00000640058 ENAMQ9NRM1 1142 aa10.03□□□□□ -0.8
CCDC7-216ENST00000640058 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
CCDC7-216ENST00000640058 POTEAQ6S8J7 498 aa10.02□□□□□ -0.81
CCDC7-216ENST00000640058 C1orf229Q6ZS94 237 aaPredicted RBP10.02□□□□□ -0.81
CCDC7-216ENST00000640058 OIP5O43482 229 aa10.01□□□□□ -0.81
CCDC7-216ENST00000640058 C1orf53Q5VUE5 145 aa10.01□□□□□ -0.81
CCDC7-216ENST00000640058 C14orf37Q86TY3 774 aa10.01□□□□□ -0.81
CCDC7-216ENST00000640058 GALNT6Q8NCL4 622 aa10.01□□□□□ -0.81
CCDC7-216ENST00000640058 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
CCDC7-216ENST00000640058 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
CCDC7-216ENST00000640058 NEURL1BA8MQ27 555 aa10□□□□□ -0.81
CCDC7-216ENST00000640058 SHISA8B8ZZ34 492 aa10□□□□□ -0.81
CCDC7-216ENST00000640058 IGFBP4P22692 258 aa10□□□□□ -0.81
CCDC7-216ENST00000640058 GRIN2CQ14957 1233 aa10□□□□□ -0.81
CCDC7-216ENST00000640058 MARK1Q9P0L2 795 aa10□□□□□ -0.81
CCDC7-216ENST00000640058 GDF2Q9UK05 429 aaPredicted RBP10□□□□□ -0.81
CCDC7-216ENST00000640058 GPC6Q9Y625 555 aaPredicted RBP10□□□□□ -0.81
CCDC7-216ENST00000640058 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
CCDC7-216ENST00000640058 EFSO43281 561 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 STAG2Q8N3U4 1231 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 GOLGA6L1Q8N7Z2 621 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 STK32AQ8WU08 396 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 SUSD3Q96L08 255 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 ZMIZ1Q9ULJ6 1067 aa9.99□□□□□ -0.81
CCDC7-216ENST00000640058 IRS1P35568 1242 aa9.98□□□□□ -0.81
CCDC7-216ENST00000640058 SFSWAPQ12872 951 aaKnown RBP9.98□□□□□ -0.81
CCDC7-216ENST00000640058 PRR12Q9ULL5 1215 aa9.98□□□□□ -0.81
CCDC7-216ENST00000640058 ARAFP10398 606 aa9.97□□□□□ -0.81
CCDC7-216ENST00000640058 PCBP4P57723 403 aaKnown RBP9.97□□□□□ -0.81
CCDC7-216ENST00000640058 FAM182BQ5T319 152 aa9.97□□□□□ -0.81
CCDC7-216ENST00000640058 PRIMPOLQ96LW4 560 aa9.97□□□□□ -0.81
CCDC7-216ENST00000640058 SERPINA10Q9UK55 444 aa9.97□□□□□ -0.81
CCDC7-216ENST00000640058 CNTNAP5Q8WYK1 1306 aa9.97□□□□□ -0.81
CCDC7-216ENST00000640058 RNF225M0QZC1 329 aaPredicted RBP9.96□□□□□ -0.82
CCDC7-216ENST00000640058 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
CCDC7-216ENST00000640058 KCNMA1Q12791 1236 aa9.96□□□□□ -0.82
CCDC7-216ENST00000640058 SLCO4C1Q6ZQN7 724 aa9.96□□□□□ -0.82
CCDC7-216ENST00000640058 VTI1AQ96AJ9 217 aa9.96□□□□□ -0.82
CCDC7-216ENST00000640058 SCARF2Q96GP6 870 aaPredicted RBP9.96□□□□□ -0.82
CCDC7-216ENST00000640058 BRD7Q9NPI1 651 aa9.96□□□□□ -0.82
CCDC7-216ENST00000640058 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
CCDC7-216ENST00000640058 PRMT3O60678 531 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 AMPD1P23109 780 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 WEE1P30291 646 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 GSK3AP49840 483 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 TYRO3Q06418 890 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 LAMC2Q13753 1193 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 RRAGCQ9HB90 399 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 KLF15Q9UIH9 416 aa9.95□□□□□ -0.82
CCDC7-216ENST00000640058 RASSF7Q02833 373 aa9.94□□□□□ -0.82
CCDC7-216ENST00000640058 RTN1Q16799 776 aa9.94□□□□□ -0.82
CCDC7-216ENST00000640058 RAB44Q7Z6P3 723 aaPredicted RBP9.94□□□□□ -0.82
CCDC7-216ENST00000640058 CCDC82Q8N4S0 544 aa9.94□□□□□ -0.82
CCDC7-216ENST00000640058 SLC30A3Q99726 388 aa9.94□□□□□ -0.82
CCDC7-216ENST00000640058 LRRC4BQ9NT99 713 aa9.94□□□□□ -0.82
CCDC7-216ENST00000640058 ACIN1Q9UKV3 1341 aaKnown RBP9.93□□□□□ -0.82
CCDC7-216ENST00000640058 FOXO3O43524 673 aa9.93□□□□□ -0.82
CCDC7-216ENST00000640058 ADH6P28332 368 aa9.93□□□□□ -0.82
CCDC7-216ENST00000640058 SNRPNP63162 240 aaKnown RBP9.93□□□□□ -0.82
CCDC7-216ENST00000640058 PODNQ7Z5L7 613 aa9.93□□□□□ -0.82
CCDC7-216ENST00000640058 FCHSD1Q86WN1 690 aa9.93□□□□□ -0.82
CCDC7-216ENST00000640058 PBXIP1Q96AQ6 731 aa9.93□□□□□ -0.82
CCDC7-216ENST00000640058 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
CCDC7-216ENST00000640058 ATG7O95352 703 aa9.92□□□□□ -0.82
CCDC7-216ENST00000640058 EPXP11678 715 aa9.92□□□□□ -0.82
CCDC7-216ENST00000640058 ELOAQ14241 798 aaKnown RBP9.92□□□□□ -0.82
CCDC7-216ENST00000640058 TMEM164Q5U3C3 297 aa9.92□□□□□ -0.82
CCDC7-216ENST00000640058 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
CCDC7-216ENST00000640058 BTLAQ7Z6A9 289 aa9.92□□□□□ -0.82
CCDC7-216ENST00000640058 C1orf115Q9H7X2 142 aa9.92□□□□□ -0.82
CCDC7-216ENST00000640058 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
CCDC7-216ENST00000640058 DGKZQ13574 1117 aa9.91□□□□□ -0.82
CCDC7-216ENST00000640058 SYT9Q86SS6 491 aa9.91□□□□□ -0.82
CCDC7-216ENST00000640058 QTRT2Q9H974 415 aaKnown RBP9.91□□□□□ -0.82
CCDC7-216ENST00000640058 GDF11O95390 407 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 SPEM2Q0P670 501 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 FAM69CQ0P6D2 419 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 HIF1AQ16665 826 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 SWI5Q1ZZU3 235 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 TMEM151AQ8N4L1 468 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.82
CCDC7-216ENST00000640058 AVENQ9NQS1 362 aaPredicted RBP9.9□□□□□ -0.82
CCDC7-216ENST00000640058 KCNH4Q9UQ05 1017 aa9.9□□□□□ -0.82
CCDC7-216ENST00000640058 BCS1LQ9Y276 419 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms