RNA–Protein interactions for RNA: ENST00000639730.1

KCNMA1-270, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 2,962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-270ENST00000639730 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
KCNMA1-270ENST00000639730 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
KCNMA1-270ENST00000639730 ANKRD24Q8TF21 1146 aa9.47□□□□□ -0.89
KCNMA1-270ENST00000639730 TSR2Q969E8 191 aaKnown RBP9.47□□□□□ -0.89
KCNMA1-270ENST00000639730 BABAM1Q9NWV8 329 aa9.47□□□□□ -0.89
KCNMA1-270ENST00000639730 PTMSP20962 102 aa9.46□□□□□ -0.89
KCNMA1-270ENST00000639730 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.89
KCNMA1-270ENST00000639730 CFAP44Q96MT7 982 aa9.46□□□□□ -0.89
KCNMA1-270ENST00000639730 NSFL1CQ9UNZ2 370 aaKnown RBP9.46□□□□□ -0.89
KCNMA1-270ENST00000639730 ZKSCAN2Q63HK3 967 aa9.46□□□□□ -0.9
KCNMA1-270ENST00000639730 AEBP1Q8IUX7 1158 aa9.46□□□□□ -0.9
KCNMA1-270ENST00000639730 GPT2Q8TD30 523 aa9.46□□□□□ -0.9
KCNMA1-270ENST00000639730 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
KCNMA1-270ENST00000639730 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.9
KCNMA1-270ENST00000639730 COL5A3P25940 1745 aaPredicted RBP9.46□□□□□ -0.9
KCNMA1-270ENST00000639730 FLAD1Q8NFF5 587 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 CHMP4AQ9BY43 222 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 ERBB3P21860 1342 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 ARFGEF2Q9Y6D5 1785 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 TRIM27P14373 513 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 KCNA4P22459 653 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 ZC3H6P61129 1189 aaKnown RBP9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 SMC4Q9NTJ3 1288 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 BRCA1P38398 1863 aaKnown RBP9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 UBR3Q6ZT12 1888 aa9.45□□□□□ -0.9
KCNMA1-270ENST00000639730 SOS1Q07889 1333 aaPredicted RBP9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 ZNF853P0CG23 659 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 FAM98CQ17RN3 349 aaKnown RBP9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 ALDH1L2Q3SY69 923 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 CCDC39Q9UFE4 941 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 IBTKQ9P2D0 1353 aaPredicted RBP9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 NBPF6Q5VWK0 638 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 PLCD3Q8N3E9 789 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 NBPF4Q96M43 638 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 STK32BQ9NY57 414 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 TMEM63CQ9P1W3 806 aa9.44□□□□□ -0.9
KCNMA1-270ENST00000639730 KIAA2012Q0VF49 1180 aa9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 EZH2Q15910 746 aaKnown RBP9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 TBC1D9Q6ZT07 1266 aa9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 DEFB132Q7Z7B7 95 aa9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 MYRIPQ8NFW9 859 aa9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 PTGER2P43116 358 aa9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
KCNMA1-270ENST00000639730 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 CSB-PGBD3P0DP91 1061 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 HDAC1Q13547 482 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 ZGPATQ8N5A5 531 aaKnown RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 TMEM57Q8N5G2 664 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 IPO8O15397 1037 aaKnown RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 APBA3O96018 575 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 TATP17735 454 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 FOXD4L6Q3SYB3 417 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 AKAP4Q5JQC9 854 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 C1orf141Q5JVX7 400 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 ANKRD45Q5TZF3 282 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 FOXD4L3Q6VB84 417 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 SPG7Q9UQ90 795 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 KIF16BQ96L93 1317 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 PXDNLA1KZ92 1463 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 GRIN3BO60391 1043 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 YY1P25490 414 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 U2AF2P26368 475 aaKnown RBP eCLIP9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 CHD1LQ86WJ1 897 aa9.42□□□□□ -0.9
KCNMA1-270ENST00000639730 CHL1O00533 1208 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 NUCB1Q02818 461 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 SSH1Q8WYL5 1049 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 TTC12Q9H892 705 aaPredicted RBP9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 NOB1Q9ULX3 412 aaKnown RBP9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 C4BP0C0L5 1744 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 MCM5P33992 734 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 LRSAM1Q6UWE0 723 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 AXIN2Q9Y2T1 843 aa9.41□□□□□ -0.9
KCNMA1-270ENST00000639730 ITGB4P16144 1822 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 KIF20AO95235 890 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 SLC15A2Q16348 729 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 CABLES1Q8TDN4 633 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 DDX19BQ9UMR2 479 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 CLEC17AQ6ZS10 378 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 AKT1S1Q96B36 256 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
KCNMA1-270ENST00000639730 ZC3H4Q9UPT8 1303 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms