RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
SMG7-216ENST00000638826 TPTE2Q6XPS3 522 aa11.14□□□□□ -0.63
SMG7-216ENST00000638826 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
SMG7-216ENST00000638826 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
SMG7-216ENST00000638826 CREBZFQ9NS37 354 aa11.14□□□□□ -0.63
SMG7-216ENST00000638826 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
SMG7-216ENST00000638826 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
SMG7-216ENST00000638826 U2AF1L5P0DN76 240 aaPredicted RBP11.13□□□□□ -0.63
SMG7-216ENST00000638826 U2AF1Q01081 240 aaKnown RBP eCLIP11.13□□□□□ -0.632e-8■■□□□ 12.3
SMG7-216ENST00000638826 PHACTR3Q96KR7 559 aa11.13□□□□□ -0.63
SMG7-216ENST00000638826 KCNQ3O43525 872 aa11.12□□□□□ -0.63
SMG7-216ENST00000638826 DDNO94850 711 aaPredicted RBP11.12□□□□□ -0.63
SMG7-216ENST00000638826 LDHDQ86WU2 507 aa11.12□□□□□ -0.63
SMG7-216ENST00000638826 RTKN2Q8IZC4 609 aa11.12□□□□□ -0.63
SMG7-216ENST00000638826 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
SMG7-216ENST00000638826 PCNTO95613 3336 aa11.12□□□□□ -0.63
SMG7-216ENST00000638826 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
SMG7-216ENST00000638826 KLRG2A4D1S0 409 aaPredicted RBP11.11□□□□□ -0.63
SMG7-216ENST00000638826 NEFMP07197 916 aa11.11□□□□□ -0.63
SMG7-216ENST00000638826 GTF2E1P29083 439 aaPredicted RBP11.11□□□□□ -0.63
SMG7-216ENST00000638826 ALDH1B1P30837 517 aa11.11□□□□□ -0.63
SMG7-216ENST00000638826 FKBP4Q02790 459 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMG7-216ENST00000638826 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
SMG7-216ENST00000638826 NIP7Q9Y221 180 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMG7-216ENST00000638826 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
SMG7-216ENST00000638826 MCM10Q7L590 875 aa11.1□□□□□ -0.63
SMG7-216ENST00000638826 PNISRQ8TF01 805 aaKnown RBP11.1□□□□□ -0.63
SMG7-216ENST00000638826 C7orf43Q8WVR3 580 aa11.1□□□□□ -0.63
SMG7-216ENST00000638826 SCN7AQ01118 1682 aa11.1□□□□□ -0.63
SMG7-216ENST00000638826 DLEC1Q9Y238 1755 aa11.09□□□□□ -0.63
SMG7-216ENST00000638826 CAPN15O75808 1086 aa11.09□□□□□ -0.63
SMG7-216ENST00000638826 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
SMG7-216ENST00000638826 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
SMG7-216ENST00000638826 TAF1DQ9H5J8 278 aaPredicted RBP11.09□□□□□ -0.63
SMG7-216ENST00000638826 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
SMG7-216ENST00000638826 PRAMEF22A3QJZ6 481 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 NBPF26B4DH59 902 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 CC2D2BQ6DHV5 1058 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 NBPF10Q6P3W6 841 aaKnown RBP11.08□□□□□ -0.64
SMG7-216ENST00000638826 PNMA8AQ86V59 439 aaPredicted RBP11.08□□□□□ -0.64
SMG7-216ENST00000638826 NBPF15Q8N660 670 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.64
SMG7-216ENST00000638826 HACL1Q9UJ83 578 aa11.08□□□□□ -0.64
SMG7-216ENST00000638826 CNTNAP1P78357 1384 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 SBF1O95248 1867 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 TMEM88BA6NKF7 163 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 ERVV-1B6SEH8 477 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 JDP2Q8WYK2 163 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 AIDAQ96BJ3 306 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 ZNF277Q9NRM2 450 aaPredicted RBP11.07□□□□□ -0.64
SMG7-216ENST00000638826 PASKQ96RG2 1323 aa11.07□□□□□ -0.64
SMG7-216ENST00000638826 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 FAM177BA6PVY3 158 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 POTEJP0CG39 1038 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 EPHX2P34913 555 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
SMG7-216ENST00000638826 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 EAPPQ56P03 285 aaPredicted RBP11.06□□□□□ -0.64
SMG7-216ENST00000638826 KIF6Q6ZMV9 814 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 GPC2Q8N158 579 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 PSMD1Q99460 953 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
SMG7-216ENST00000638826 FZD9O00144 591 aa11.05□□□□□ -0.64
SMG7-216ENST00000638826 EIF6P56537 245 aaKnown RBP11.05□□□□□ -0.64
SMG7-216ENST00000638826 CRY2Q49AN0 593 aa11.05□□□□□ -0.64
SMG7-216ENST00000638826 SYNE4Q8N205 404 aa11.05□□□□□ -0.64
SMG7-216ENST00000638826 RPGRQ92834 1020 aaKnown RBP11.05□□□□□ -0.64
SMG7-216ENST00000638826 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
SMG7-216ENST00000638826 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
SMG7-216ENST00000638826 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
SMG7-216ENST00000638826 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
SMG7-216ENST00000638826 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
SMG7-216ENST00000638826 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
SMG7-216ENST00000638826 CTCFP49711 727 aaPredicted RBP11.04□□□□□ -0.64
SMG7-216ENST00000638826 HLFQ16534 295 aa11.04□□□□□ -0.64
SMG7-216ENST00000638826 MAP3K15Q6ZN16 1313 aa11.04□□□□□ -0.64
SMG7-216ENST00000638826 IBTKQ9P2D0 1353 aaPredicted RBP11.03□□□□□ -0.64
SMG7-216ENST00000638826 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
SMG7-216ENST00000638826 CNTROBQ8N137 903 aa11.03□□□□□ -0.64
SMG7-216ENST00000638826 MIS18AQ9NYP9 233 aa11.03□□□□□ -0.64
SMG7-216ENST00000638826 ANKRD31Q8N7Z5 1873 aa11.03□□□□□ -0.64
SMG7-216ENST00000638826 COL11A2P13942 1736 aaPredicted RBP11.03□□□□□ -0.64
SMG7-216ENST00000638826 ERBB4Q15303 1308 aa11.03□□□□□ -0.64
SMG7-216ENST00000638826 RNF123Q5XPI4 1314 aa11.03□□□□□ -0.64
SMG7-216ENST00000638826 FOXN1O15353 648 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 VEGFBP49765 207 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
SMG7-216ENST00000638826 PARP10Q53GL7 1025 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 OLFM4Q6UX06 510 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 NGEFQ8N5V2 710 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 RBM17Q96I25 401 aaKnown RBP11.02□□□□□ -0.65
SMG7-216ENST00000638826 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
SMG7-216ENST00000638826 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
SMG7-216ENST00000638826 MAPK8IP3Q9UPT6 1336 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 FER1L6Q2WGJ9 1857 aa11.02□□□□□ -0.65
SMG7-216ENST00000638826 RIC1Q4ADV7 1423 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms