RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
CAPN3-221ENST00000638141 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
CAPN3-221ENST00000638141 TYRO3Q06418 890 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 LRRC8AQ8IWT6 810 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 GTF3C6Q969F1 213 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 SETD1BQ9UPS6 1966 aaKnown RBP14.19□□□□□ -0.14
CAPN3-221ENST00000638141 SPATA31D1Q6ZQQ2 1576 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
CAPN3-221ENST00000638141 APPP05067 770 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 DRC7Q8IY82 874 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 CCDC191Q8NCU4 936 aa14.19□□□□□ -0.14
CAPN3-221ENST00000638141 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 C10orf67Q8IYJ2 551 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 EXOC4Q96A65 974 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 ESYT1Q9BSJ8 1104 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 NRBP1Q9UHY1 535 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 JRKLQ9Y4A0 524 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 TNRQ92752 1358 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 STX6O43752 255 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 TRIM5Q9C035 493 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 CBX8Q9HC52 389 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 RRP15Q9Y3B9 282 aaKnown RBP14.18□□□□□ -0.14
CAPN3-221ENST00000638141 RPGRIP1LQ68CZ1 1315 aa14.18□□□□□ -0.14
CAPN3-221ENST00000638141 HMMRO75330 724 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 SRPK2P78362 688 aaKnown RBP14.17□□□□□ -0.14
CAPN3-221ENST00000638141 SWT1Q5T5J6 900 aaKnown RBP14.17□□□□□ -0.14
CAPN3-221ENST00000638141 TMCO3Q6UWJ1 677 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 ZBTB9Q96C00 473 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 AK7Q96M32 723 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 TPM1P09493 284 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 MAGEA9P43362 315 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 KCNJ6P48051 423 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 NFE2L2Q16236 605 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 CEP85Q6P2H3 762 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 SUGP1Q8IWZ8 645 aaKnown RBP14.17□□□□□ -0.14
CAPN3-221ENST00000638141 C16orf71Q8IYS4 520 aaPredicted RBP14.17□□□□□ -0.14
CAPN3-221ENST00000638141 CCAR2Q8N163 923 aaKnown RBP14.17□□□□□ -0.14
CAPN3-221ENST00000638141 SMARCE1Q969G3 411 aa14.17□□□□□ -0.14
CAPN3-221ENST00000638141 TRIM66O15016 1216 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 IVLP07476 585 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 ATP2B1P20020 1258 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.16□□□□□ -0.14
CAPN3-221ENST00000638141 CEP83Q9Y592 693 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 KIF20BQ96Q89 1820 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 RPS6KA5O75582 802 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 CCDC172P0C7W6 258 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 IDI1Q13907 227 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 LUZP1Q86V48 1076 aa14.16□□□□□ -0.14
CAPN3-221ENST00000638141 TTC31Q49AM3 519 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-221ENST00000638141 CEP120Q8N960 986 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 OTUD7AQ8TE49 926 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-221ENST00000638141 LCMT1Q9UIC8 334 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 FIBPO43427 364 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 SYT1P21579 422 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 ERCC6LQ2NKX8 1250 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 CCDC144BQ3MJ40 725 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 CCDC144CPQ8IYA2 1237 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 PALD1Q9ULE6 856 aa14.15□□□□□ -0.14
CAPN3-221ENST00000638141 AOX1Q06278 1338 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 KIAA0232Q92628 1395 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 USP27XA6NNY8 438 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 KIF1CO43896 1103 aaKnown RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 PDE1AP54750 535 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 GSCP56915 257 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 CCZ1BP86790 482 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 CCZ1P86791 482 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 TWISTNBQ3B726 338 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 CHMP4CQ96CF2 233 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 CDK12Q9NYV4 1490 aaPredicted RBP14.14□□□□□ -0.15
CAPN3-221ENST00000638141 ST5P78524 1137 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 TSGA10IPQ3SY00 556 aa14.14□□□□□ -0.15
CAPN3-221ENST00000638141 A0A1W2PP64 1363 aa14.13□□□□□ -0.15
CAPN3-221ENST00000638141 CPP00450 1065 aa14.13□□□□□ -0.15
CAPN3-221ENST00000638141 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
CAPN3-221ENST00000638141 SKILP12757 684 aa14.13□□□□□ -0.15
CAPN3-221ENST00000638141 ACTN2P35609 894 aa14.13□□□□□ -0.15
CAPN3-221ENST00000638141 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
CAPN3-221ENST00000638141 ANO6Q4KMQ2 910 aa14.13□□□□□ -0.15
CAPN3-221ENST00000638141 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.13□□□□□ -0.15
CAPN3-221ENST00000638141 DONSONQ9NYP3 566 aa14.13□□□□□ -0.15
CAPN3-221ENST00000638141 ORC3Q9UBD5 711 aaPredicted RBP14.13□□□□□ -0.15
CAPN3-221ENST00000638141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.13□□□□□ -0.15
CAPN3-221ENST00000638141 CHD2O14647 1828 aaKnown RBP14.12□□□□□ -0.15
CAPN3-221ENST00000638141 GYS2P54840 703 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 ARHGAP29Q52LW3 1261 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 CCDC91Q7Z6B0 441 aa14.12□□□□□ -0.15
CAPN3-221ENST00000638141 REXO1L1PQ8IX06 675 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms