RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 C9orf78Q9NZ63 289 aaPredicted RBP15.34■□□□□ 0.05
TCF4-289ENST00000637941 SLIT3O75094 1523 aa15.33■□□□□ 0.04
TCF4-289ENST00000637941 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
TCF4-289ENST00000637941 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
TCF4-289ENST00000637941 FAM184AQ8NB25 1140 aa15.33■□□□□ 0.04
TCF4-289ENST00000637941 C19orf44Q9H6X5 657 aa15.33■□□□□ 0.04
TCF4-289ENST00000637941 DDX58O95786 925 aaKnown RBP15.32■□□□□ 0.04
TCF4-289ENST00000637941 TERF1P54274 439 aa15.32■□□□□ 0.04
TCF4-289ENST00000637941 KSR2Q6VAB6 950 aa15.32■□□□□ 0.04
TCF4-289ENST00000637941 ZSCAN31Q96LW9 406 aaPredicted RBP15.32■□□□□ 0.04
TCF4-289ENST00000637941 TTC14Q96N46 770 aa15.32■□□□□ 0.04
TCF4-289ENST00000637941 ECHDC1Q9NTX5 307 aa15.32■□□□□ 0.04
TCF4-289ENST00000637941 HYPKQ9NX55 129 aa15.32■□□□□ 0.04
TCF4-289ENST00000637941 SIPA1L3O60292 1781 aaPredicted RBP15.32■□□□□ 0.04
TCF4-289ENST00000637941 OFD1O75665 1012 aa15.32■□□□□ 0.04
TCF4-289ENST00000637941 MAP4K4O95819 1239 aaPredicted RBP15.32■□□□□ 0.04
TCF4-289ENST00000637941 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
TCF4-289ENST00000637941 ZNF500O60304 480 aaPredicted RBP15.31■□□□□ 0.04
TCF4-289ENST00000637941 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
TCF4-289ENST00000637941 TM6SF1Q9BZW5 370 aa15.31■□□□□ 0.04
TCF4-289ENST00000637941 SH2B1Q9NRF2 756 aaPredicted RBP15.31■□□□□ 0.04
TCF4-289ENST00000637941 SMC3Q9UQE7 1217 aa15.31■□□□□ 0.04
TCF4-289ENST00000637941 ZSCAN22P10073 491 aaPredicted RBP15.31■□□□□ 0.04
TCF4-289ENST00000637941 UVSSAQ2YD98 709 aa15.31■□□□□ 0.04
TCF4-289ENST00000637941 CWC27Q6UX04 472 aaKnown RBP15.31■□□□□ 0.04
TCF4-289ENST00000637941 IL25Q9H293 177 aa15.31■□□□□ 0.04
TCF4-289ENST00000637941 MAP3K2Q9Y2U5 619 aa15.31■□□□□ 0.04
TCF4-289ENST00000637941 RPAP1Q9BWH6 1393 aaPredicted RBP15.31■□□□□ 0.04
TCF4-289ENST00000637941 AK2P54819 239 aa15.3■□□□□ 0.04
TCF4-289ENST00000637941 VPS53Q5VIR6 699 aa15.3■□□□□ 0.04
TCF4-289ENST00000637941 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
TCF4-289ENST00000637941 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
TCF4-289ENST00000637941 RRP9O43818 475 aaKnown RBP15.29■□□□□ 0.04
TCF4-289ENST00000637941 GIGYF1O75420 1035 aaPredicted RBP15.29■□□□□ 0.04
TCF4-289ENST00000637941 CCDC183Q5T5S1 534 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 MPRIPQ6WCQ1 1025 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 USP48Q86UV5 1035 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 ADAMTS7Q9UKP4 1686 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 STX6O43752 255 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 ZKSCAN1P17029 563 aaPredicted RBP15.29■□□□□ 0.04
TCF4-289ENST00000637941 LINS1Q8NG48 757 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 KCNB2Q92953 911 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 ZKSCAN5Q9Y2L8 839 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
TCF4-289ENST00000637941 KCNQ3O43525 872 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
TCF4-289ENST00000637941 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 TCHHQ07283 1943 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 TMEM94Q12767 1356 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 UTYO14607 1347 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 ATF3P18847 181 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 UBE2HP62256 183 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 KRT28Q7Z3Y7 464 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 ARHGEF25Q86VW2 580 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 PDRG1Q9NUG6 133 aa15.28■□□□□ 0.04
TCF4-289ENST00000637941 HSPA2P54652 639 aa15.27■□□□□ 0.04
TCF4-289ENST00000637941 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.04
TCF4-289ENST00000637941 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.04
TCF4-289ENST00000637941 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
TCF4-289ENST00000637941 LRRC59Q96AG4 307 aaKnown RBP15.27■□□□□ 0.04
TCF4-289ENST00000637941 PXDNQ92626 1479 aa15.27■□□□□ 0.03
TCF4-289ENST00000637941 GRM8O00222 908 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 F13A1P00488 732 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 GCP02774 474 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 PSMA5P28066 241 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 CHAMP1Q96JM3 812 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 ZSWIM6Q9HCJ5 1215 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 DDX21Q9NR30 783 aaKnown RBP eCLIP15.26■□□□□ 0.03
TCF4-289ENST00000637941 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 SYT1P21579 422 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 GLIPR1L2Q4G1C9 344 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 LMOD2Q6P5Q4 547 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 AACSQ86V21 672 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 ANKRD24Q8TF21 1146 aa15.26■□□□□ 0.03
TCF4-289ENST00000637941 CCDC171Q6TFL3 1326 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 ANXA1P04083 346 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 RNF20Q5VTR2 975 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 JAKMIP1Q96N16 626 aaKnown RBP15.25■□□□□ 0.03
TCF4-289ENST00000637941 STRCP1A6NGW2 1772 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 TRPM3Q9HCF6 1732 aaPredicted RBP15.25■□□□□ 0.03
TCF4-289ENST00000637941 DCCP43146 1447 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 PTMAP06454 111 aaKnown RBP15.25■□□□□ 0.03
TCF4-289ENST00000637941 NEXNQ0ZGT2 675 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
TCF4-289ENST00000637941 ANKRD1Q15327 319 aa15.25■□□□□ 0.03
TCF4-289ENST00000637941 KCNJ4P48050 445 aa15.24■□□□□ 0.03
TCF4-289ENST00000637941 PRPF40BQ6NWY9 871 aaKnown RBP15.24■□□□□ 0.03
TCF4-289ENST00000637941 LARP1Q6PKG0 1096 aaKnown RBP15.24■□□□□ 0.03
TCF4-289ENST00000637941 MST1RQ04912 1400 aa15.24■□□□□ 0.03
TCF4-289ENST00000637941 GADD45BO75293 160 aaPredicted RBP15.23■□□□□ 0.03
TCF4-289ENST00000637941 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
TCF4-289ENST00000637941 RNF214Q8ND24 703 aa15.23■□□□□ 0.03
TCF4-289ENST00000637941 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
TCF4-289ENST00000637941 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
TCF4-289ENST00000637941 SCN11AQ9UI33 1791 aa15.23■□□□□ 0.03
TCF4-289ENST00000637941 PDCP20941 246 aa15.23■□□□□ 0.03
TCF4-289ENST00000637941 UBE2Q2Q8WVN8 375 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms