RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 LINS1Q8NG48 757 aa14.8□□□□□ -0.04
CLN6-223ENST00000637823 MEIS3Q99687 375 aa14.8□□□□□ -0.04
CLN6-223ENST00000637823 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
CLN6-223ENST00000637823 IBTKQ9P2D0 1353 aaPredicted RBP14.8□□□□□ -0.04
CLN6-223ENST00000637823 IL6STP40189 918 aaPredicted RBP14.79□□□□□ -0.04
CLN6-223ENST00000637823 ITPK1Q13572 414 aa14.79□□□□□ -0.04
CLN6-223ENST00000637823 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
CLN6-223ENST00000637823 TAF1LQ8IZX4 1826 aa14.79□□□□□ -0.04
CLN6-223ENST00000637823 CCDC87Q9NVE4 849 aa14.79□□□□□ -0.04
CLN6-223ENST00000637823 GNAI2P04899 355 aa14.78□□□□□ -0.04
CLN6-223ENST00000637823 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
CLN6-223ENST00000637823 INTS5Q6P9B9 1019 aaKnown RBP14.78□□□□□ -0.04
CLN6-223ENST00000637823 TTLL7Q6ZT98 887 aa14.78□□□□□ -0.04
CLN6-223ENST00000637823 RPAP2Q8IXW5 612 aaPredicted RBP14.78□□□□□ -0.04
CLN6-223ENST00000637823 PELP1Q8IZL8 1130 aaKnown RBP14.78□□□□□ -0.04
CLN6-223ENST00000637823 HDAC5Q9UQL6 1122 aa14.78□□□□□ -0.04
CLN6-223ENST00000637823 NUP98P52948 1817 aa14.78□□□□□ -0.04
CLN6-223ENST00000637823 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
CLN6-223ENST00000637823 NPM2Q86SE8 214 aaKnown RBP14.77□□□□□ -0.05
CLN6-223ENST00000637823 MYD88Q99836 296 aa14.77□□□□□ -0.05
CLN6-223ENST00000637823 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
CLN6-223ENST00000637823 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
CLN6-223ENST00000637823 RC3H1Q5TC82 1133 aaKnown RBP14.76□□□□□ -0.05
CLN6-223ENST00000637823 ANKRD44Q8N8A2 993 aa14.76□□□□□ -0.05
CLN6-223ENST00000637823 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
CLN6-223ENST00000637823 C9orf78Q9NZ63 289 aaPredicted RBP14.76□□□□□ -0.05
CLN6-223ENST00000637823 ZBTB1Q9Y2K1 713 aa14.76□□□□□ -0.05
CLN6-223ENST00000637823 NEURL1BA8MQ27 555 aa14.75□□□□□ -0.05
CLN6-223ENST00000637823 TRIM37O94972 964 aa14.75□□□□□ -0.05
CLN6-223ENST00000637823 EIF5P55010 431 aaKnown RBP14.75□□□□□ -0.05
CLN6-223ENST00000637823 CWF19L2Q2TBE0 894 aaKnown RBP14.75□□□□□ -0.05
CLN6-223ENST00000637823 CCNL1Q9UK58 526 aaPredicted RBP14.75□□□□□ -0.05
CLN6-223ENST00000637823 ZNF330Q9Y3S2 320 aaPredicted RBP14.75□□□□□ -0.05
CLN6-223ENST00000637823 UTYO14607 1347 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 MAP3K15Q6ZN16 1313 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 CNTNAP4Q9C0A0 1308 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 ERVV-1B6SEH8 477 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 HMGB2P26583 209 aaKnown RBP14.74□□□□□ -0.05
CLN6-223ENST00000637823 GCKRQ14397 625 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 CEP85Q6P2H3 762 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 LINC00116Q8NCU8 138 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 ANKRD36CQ5JPF3 1778 aa14.74□□□□□ -0.05
CLN6-223ENST00000637823 A0A087WZG4 1122 aa14.73□□□□□ -0.05
CLN6-223ENST00000637823 GRM8O00222 908 aa14.73□□□□□ -0.05
CLN6-223ENST00000637823 NBPF7P0C2Y1 421 aaPredicted RBP14.73□□□□□ -0.05
CLN6-223ENST00000637823 TCIRG1Q13488 830 aa14.73□□□□□ -0.05
CLN6-223ENST00000637823 HMMRO75330 724 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 ATP8B2P98198 1209 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
CLN6-223ENST00000637823 HSP90AB3PQ58FF7 597 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 SLC27A3Q5K4L6 730 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 GIGYF2Q6Y7W6 1299 aaKnown RBP14.72□□□□□ -0.05
CLN6-223ENST00000637823 DZIP3Q86Y13 1208 aaKnown RBP14.72□□□□□ -0.05
CLN6-223ENST00000637823 SMC5Q8IY18 1101 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 CCDC191Q8NCU4 936 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 ARXQ96QS3 562 aa14.72□□□□□ -0.05
CLN6-223ENST00000637823 LRRFIP2Q9Y608 721 aaKnown RBP14.72□□□□□ -0.05
CLN6-223ENST00000637823 ATP5J2-PTCD1G3V325 749 aa14.71□□□□□ -0.05
CLN6-223ENST00000637823 KCNQ4P56696 695 aa14.71□□□□□ -0.05
CLN6-223ENST00000637823 GCC1Q96CN9 775 aa14.71□□□□□ -0.05
CLN6-223ENST00000637823 ISCA1Q9BUE6 129 aa14.71□□□□□ -0.05
CLN6-223ENST00000637823 CWC25Q9NXE8 425 aaPredicted RBP14.71□□□□□ -0.05
CLN6-223ENST00000637823 TBC1D2BQ9UPU7 963 aa14.71□□□□□ -0.05
CLN6-223ENST00000637823 C4BP0C0L5 1744 aa14.7□□□□□ -0.06
CLN6-223ENST00000637823 PLSCR1O15162 318 aa14.7□□□□□ -0.06
CLN6-223ENST00000637823 RPS6KA4O75676 772 aa14.7□□□□□ -0.06
CLN6-223ENST00000637823 DCTPP1Q9H773 170 aa14.7□□□□□ -0.06
CLN6-223ENST00000637823 H7C1W4 665 aa14.69□□□□□ -0.06
CLN6-223ENST00000637823 COL15A1P39059 1388 aa14.69□□□□□ -0.06
CLN6-223ENST00000637823 BCORQ6W2J9 1755 aa14.68□□□□□ -0.06
CLN6-223ENST00000637823 RGL2O15211 777 aa14.68□□□□□ -0.06
CLN6-223ENST00000637823 HLFQ16534 295 aa14.68□□□□□ -0.06
CLN6-223ENST00000637823 LRRC4BQ9NT99 713 aa14.68□□□□□ -0.06
CLN6-223ENST00000637823 TNS1Q9HBL0 1735 aaKnown RBP14.67□□□□□ -0.06
CLN6-223ENST00000637823 CAMTA2O94983 1202 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 APBA3O96018 575 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 CASP7P55210 303 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 MTX1Q13505 466 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 ZNF34Q8IZ26 560 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 SSH3Q8TE77 659 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 PDZRN3Q9UPQ7 1066 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
CLN6-223ENST00000637823 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
CLN6-223ENST00000637823 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
CLN6-223ENST00000637823 UBR3Q6ZT12 1888 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 NUCB1Q02818 461 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 TXNRD1Q16881 649 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 CLEC4GQ6UXB4 293 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 PPP1R42Q7Z4L9 355 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 SUCLG2Q96I99 432 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 ZNF652Q9Y2D9 606 aa14.66□□□□□ -0.06
CLN6-223ENST00000637823 GNPATO15228 680 aa14.65□□□□□ -0.06
CLN6-223ENST00000637823 POLA2Q14181 598 aa14.65□□□□□ -0.06
CLN6-223ENST00000637823 NLRP10Q86W26 655 aa14.65□□□□□ -0.06
CLN6-223ENST00000637823 PROM2Q8N271 834 aa14.65□□□□□ -0.06
CLN6-223ENST00000637823 KAZALD1Q96I82 304 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms