RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	MRPL50	Q8N5N7	158 aa	Known RBP	28.64	■■■□□ 2.18
CHRNA7-231	ENST00000637786	ARX	Q96QS3	562 aa		28.64	■■■□□ 2.18
CHRNA7-231	ENST00000637786	SRP68	Q9UHB9	627 aa	Known RBP	28.64	■■■□□ 2.18
CHRNA7-231	ENST00000637786	GYS1	P13807	737 aa		28.63	■■■□□ 2.17
CHRNA7-231	ENST00000637786	AIMP1	Q12904	312 aa	Known RBP	28.63	■■■□□ 2.17
CHRNA7-231	ENST00000637786	USPL1	Q5W0Q7	1092 aa		28.63	■■■□□ 2.17
CHRNA7-231	ENST00000637786	CLEC4G	Q6UXB4	293 aa		28.63	■■■□□ 2.17
CHRNA7-231	ENST00000637786	SMC4	Q9NTJ3	1288 aa		28.63	■■■□□ 2.17
CHRNA7-231	ENST00000637786	NUP98	P52948	1817 aa		28.63	■■■□□ 2.17
CHRNA7-231	ENST00000637786	DDX58	O95786	925 aa	Known RBP	28.62	■■■□□ 2.17
CHRNA7-231	ENST00000637786	FLII	Q13045	1269 aa		28.62	■■■□□ 2.17
CHRNA7-231	ENST00000637786	ZNF652	Q9Y2D9	606 aa		28.62	■■■□□ 2.17
CHRNA7-231	ENST00000637786	ANKRD13D	Q6ZTN6	518 aa		28.61	■■■□□ 2.17
CHRNA7-231	ENST00000637786	G2E3	Q7L622	706 aa		28.61	■■■□□ 2.17
CHRNA7-231	ENST00000637786	NLGN1	Q8N2Q7	840 aa		28.61	■■■□□ 2.17
CHRNA7-231	ENST00000637786	PLBD2	Q8NHP8	589 aa		28.61	■■■□□ 2.17
CHRNA7-231	ENST00000637786	MTFR1L	Q9H019	292 aa		28.61	■■■□□ 2.17
CHRNA7-231	ENST00000637786	BCL2L12	Q9HB09	334 aa		28.61	■■■□□ 2.17
CHRNA7-231	ENST00000637786	ARFGEF2	Q9Y6D5	1785 aa		28.6	■■■□□ 2.17
CHRNA7-231	ENST00000637786	BCL2L13	Q9BXK5	485 aa		28.59	■■■□□ 2.17
CHRNA7-231	ENST00000637786	GIGYF2	Q6Y7W6	1299 aa	Known RBP	28.58	■■■□□ 2.17
CHRNA7-231	ENST00000637786	ZBTB3	Q9H5J0	574 aa		28.58	■■■□□ 2.17
CHRNA7-231	ENST00000637786	PTPRC	P08575	1304 aa		28.58	■■■□□ 2.17
CHRNA7-231	ENST00000637786	FKBP8	Q14318	412 aa		28.57	■■■□□ 2.16
CHRNA7-231	ENST00000637786	KSR2	Q6VAB6	950 aa		28.57	■■■□□ 2.16
CHRNA7-231	ENST00000637786	KIF16B	Q96L93	1317 aa		28.57	■■■□□ 2.16
CHRNA7-231	ENST00000637786	FKBP5	Q13451	457 aa	Predicted RBP	28.56	■■■□□ 2.16
CHRNA7-231	ENST00000637786	HLF	Q16534	295 aa		28.56	■■■□□ 2.16
CHRNA7-231	ENST00000637786	ANKRD36C	Q5JPF3	1778 aa		28.56	■■■□□ 2.16
CHRNA7-231	ENST00000637786	ATP10D	Q9P241	1426 aa		28.56	■■■□□ 2.16
CHRNA7-231	ENST00000637786	ZBTB7A	O95365	584 aa		28.55	■■■□□ 2.16
CHRNA7-231	ENST00000637786	HSP90AB3P	Q58FF7	597 aa		28.55	■■■□□ 2.16
CHRNA7-231	ENST00000637786	RIC3	Q7Z5B4	369 aa		28.55	■■■□□ 2.16
CHRNA7-231	ENST00000637786	RCAN3	Q9UKA8	241 aa		28.55	■■■□□ 2.16
CHRNA7-231	ENST00000637786	ADCY9	O60503	1353 aa		28.54	■■■□□ 2.16
CHRNA7-231	ENST00000637786	PI4KAP2	A4QPH2	592 aa		28.53	■■■□□ 2.16
CHRNA7-231	ENST00000637786	PI4KAP1	Q8N8J0	262 aa		28.53	■■■□□ 2.16
CHRNA7-231	ENST00000637786	BCAR3	O75815	825 aa		28.52	■■■□□ 2.16
CHRNA7-231	ENST00000637786	TM4SF1	P30408	202 aa		28.52	■■■□□ 2.16
CHRNA7-231	ENST00000637786	TCIRG1	Q13488	830 aa		28.52	■■■□□ 2.16
CHRNA7-231	ENST00000637786	MSL1	Q68DK7	614 aa		28.52	■■■□□ 2.16
CHRNA7-231	ENST00000637786	MAP3K2	Q9Y2U5	619 aa		28.52	■■■□□ 2.16
CHRNA7-231	ENST00000637786	NFIX	Q14938	502 aa		28.51	■■■□□ 2.15
CHRNA7-231	ENST00000637786	TBC1D9B	Q66K14	1250 aa		28.51	■■■□□ 2.15
CHRNA7-231	ENST00000637786	ARHGAP45	Q92619	1136 aa		28.51	■■■□□ 2.15
CHRNA7-231	ENST00000637786	SPON1	Q9HCB6	807 aa		28.51	■■■□□ 2.15
CHRNA7-231	ENST00000637786	ZNF34	Q8IZ26	560 aa		28.5	■■■□□ 2.15
CHRNA7-231	ENST00000637786	METTL22	Q9BUU2	404 aa	Predicted RBP	28.5	■■■□□ 2.15
CHRNA7-231	ENST00000637786	IPO8	O15397	1037 aa	Known RBP	28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	MMP10	P09238	476 aa		28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	DNAAF4	Q8WXU2	420 aa		28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	SETDB2	Q96T68	719 aa		28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	NOB1	Q9ULX3	412 aa	Known RBP	28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	CARMIL3	Q8ND23	1372 aa		28.49	■■■□□ 2.15
CHRNA7-231	ENST00000637786	POLD1	P28340	1107 aa		28.48	■■■□□ 2.15
CHRNA7-231	ENST00000637786	SGIP1	Q9BQI5	828 aa		28.48	■■■□□ 2.15
CHRNA7-231	ENST00000637786	NIP7	Q9Y221	180 aa	Known RBP eCLIP	28.48	■■■□□ 2.15
CHRNA7-231	ENST00000637786	TRIM28	Q13263	835 aa	Known RBP	28.47	■■■□□ 2.15
CHRNA7-231	ENST00000637786	API5	Q9BZZ5	524 aa	Known RBP	28.47	■■■□□ 2.15
CHRNA7-231	ENST00000637786	PTGER2	P43116	358 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	DDR1	Q08345	913 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	NEXN	Q0ZGT2	675 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	PARP10	Q53GL7	1025 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	ISCA1	Q9BUE6	129 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	NRXN2	Q9P2S2	1712 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	PXDNL	A1KZ92	1463 aa		28.46	■■■□□ 2.15
CHRNA7-231	ENST00000637786	POLRMT	O00411	1230 aa	Known RBP	28.45	■■■□□ 2.14
CHRNA7-231	ENST00000637786	BICDL1	Q6ZP65	573 aa		28.45	■■■□□ 2.14
CHRNA7-231	ENST00000637786	PARP3	Q9Y6F1	533 aa		28.45	■■■□□ 2.14
CHRNA7-231	ENST00000637786	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.45	■■■□□ 2.14
CHRNA7-231	ENST00000637786	UBN2	Q6ZU65	1347 aa		28.44	■■■□□ 2.14
CHRNA7-231	ENST00000637786	AFDN	P55196	1824 aa	Known RBP	28.44	■■■□□ 2.14
CHRNA7-231	ENST00000637786		F6X3S4	739 aa		28.44	■■■□□ 2.14
CHRNA7-231	ENST00000637786	MYD88	Q99836	296 aa		28.44	■■■□□ 2.14
CHRNA7-231	ENST00000637786	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.43	■■■□□ 2.14
CHRNA7-231	ENST00000637786	GPT	P24298	496 aa		28.43	■■■□□ 2.14
CHRNA7-231	ENST00000637786	ZKSCAN2	Q63HK3	967 aa		28.43	■■■□□ 2.14
CHRNA7-231	ENST00000637786	LRP5	O75197	1615 aa		28.43	■■■□□ 2.14
CHRNA7-231	ENST00000637786	ATF7IP	Q6VMQ6	1270 aa		28.42	■■■□□ 2.14
CHRNA7-231	ENST00000637786	NLRP10	Q86W26	655 aa		28.42	■■■□□ 2.14
CHRNA7-231	ENST00000637786	LINS1	Q8NG48	757 aa		28.42	■■■□□ 2.14
CHRNA7-231	ENST00000637786	FRAT1	Q92837	279 aa	Predicted RBP	28.42	■■■□□ 2.14
CHRNA7-231	ENST00000637786	SERPINB2	P05120	415 aa		28.41	■■■□□ 2.14
CHRNA7-231	ENST00000637786	CCDC191	Q8NCU4	936 aa		28.41	■■■□□ 2.14
CHRNA7-231	ENST00000637786	RNF123	Q5XPI4	1314 aa		28.41	■■■□□ 2.14
CHRNA7-231	ENST00000637786	ATP5J2-PTCD1	G3V325	749 aa		28.4	■■■□□ 2.14
CHRNA7-231	ENST00000637786	IGKV5-2	P06315	115 aa		28.4	■■■□□ 2.14
CHRNA7-231	ENST00000637786	BEND3	Q5T5X7	828 aa		28.4	■■■□□ 2.14
CHRNA7-231	ENST00000637786	PPP1R42	Q7Z4L9	355 aa		28.4	■■■□□ 2.14
CHRNA7-231	ENST00000637786	NYX	Q9GZU5	481 aa		28.4	■■■□□ 2.14
CHRNA7-231	ENST00000637786	TRIM27	P14373	513 aa		28.39	■■■□□ 2.14
CHRNA7-231	ENST00000637786	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.39	■■■□□ 2.14
CHRNA7-231	ENST00000637786	NEURL1B	A8MQ27	555 aa		28.38	■■■□□ 2.13
CHRNA7-231	ENST00000637786	SUSD4	Q5VX71	490 aa		28.38	■■■□□ 2.13
CHRNA7-231	ENST00000637786	SLC4A10	Q6U841	1118 aa		28.38	■■■□□ 2.13
CHRNA7-231	ENST00000637786	TPTE2	Q6XPS3	522 aa		28.38	■■■□□ 2.13
CHRNA7-231	ENST00000637786	CWC25	Q9NXE8	425 aa	Predicted RBP	28.38	■■■□□ 2.13
CHRNA7-231	ENST00000637786	ABCC4	O15439	1325 aa		28.38	■■■□□ 2.13
CHRNA7-231	ENST00000637786	ALDH1L1	O75891	902 aa		28.37	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms