RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 PIP4K2BP78356 416 aa20.68■□□□□ 0.9
CACNA1A-247ENST00000637769 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
CACNA1A-247ENST00000637769 ALDH3A1P30838 453 aa20.68■□□□□ 0.9
CACNA1A-247ENST00000637769 NOP2P46087 812 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-247ENST00000637769 CEP83Q9Y592 693 aa20.68■□□□□ 0.9
CACNA1A-247ENST00000637769 USH1CQ9Y6N9 552 aa20.68■□□□□ 0.9
CACNA1A-247ENST00000637769 IDH1O75874 414 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 ANKRD30BQ9BXX2 1392 aa20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 ATP2A2P16615 1042 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 RPGRIP1LQ68CZ1 1315 aa20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 TTF1Q15361 905 aaPredicted RBP20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 SYCP3Q8IZU3 236 aa20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 ATAD2Q6PL18 1390 aa20.67■□□□□ 0.9
CACNA1A-247ENST00000637769 POLR3DP05423 398 aaPredicted RBP20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 SYNCQ9H7C4 482 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 IFIT1P09914 478 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 ERMNQ8TAM6 284 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 MXRA7P84157 204 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 PRPF4BQ13523 1007 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 C1orf115Q9H7X2 142 aa20.66■□□□□ 0.9
CACNA1A-247ENST00000637769 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 ZNF530Q6P9A1 599 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 FAM114A2Q9NRY5 505 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 ESCO1Q5FWF5 840 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 GPATCH11Q8N954 259 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 KRT222Q8N1A0 295 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 PPP2R1AP30153 589 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 STX6O43752 255 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 ZFYP08048 801 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 CAMK4Q16566 473 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 TOM1L2Q6ZVM7 507 aa20.65■□□□□ 0.9
CACNA1A-247ENST00000637769 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.9
CACNA1A-247ENST00000637769 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.9
CACNA1A-247ENST00000637769 LMBR1Q8WVP7 490 aa20.64■□□□□ 0.9
CACNA1A-247ENST00000637769 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.9
CACNA1A-247ENST00000637769 MYL6BP14649 208 aa20.64■□□□□ 0.89
CACNA1A-247ENST00000637769 USP25Q9UHP3 1055 aa20.64■□□□□ 0.89
CACNA1A-247ENST00000637769 C16orf45Q96MC5 204 aaPredicted RBP20.64■□□□□ 0.89
CACNA1A-247ENST00000637769 METTL24Q5JXM2 366 aa20.64■□□□□ 0.89
CACNA1A-247ENST00000637769 SMC1BQ8NDV3 1235 aa20.64■□□□□ 0.89
CACNA1A-247ENST00000637769 SNX16P57768 344 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 GON4LQ3T8J9 2241 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 CYLC1P35663 651 aaPredicted RBP20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 UVSSAQ2YD98 709 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 IPO4Q8TEX9 1081 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 CCDC40Q4G0X9 1142 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 CTAGE9A4FU28 777 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 CCDC141Q6ZP82 1450 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 A6NNZ2 444 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 TUBB8Q3ZCM7 444 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 MSANTD4Q8NCY6 345 aa20.63■□□□□ 0.89
CACNA1A-247ENST00000637769 CCDC160A6NGH7 325 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 DNAJC21Q5F1R6 531 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 HMG20BQ9P0W2 317 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 PDE4BQ07343 736 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 LRSAM1Q6UWE0 723 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 LIMCH1Q9UPQ0 1083 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 ZPR1O75312 459 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 ARID4AP29374 1257 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 RGS22Q8NE09 1264 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 ABCF2Q9UG63 623 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 UBE2HP62256 183 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 ZBTB16Q05516 673 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 SETSIPP0DME0 302 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 MX1P20591 662 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 NBPF1Q3BBV0 1214 aa20.62■□□□□ 0.89
CACNA1A-247ENST00000637769 GAS8O95995 478 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 FCHSD2O94868 740 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 ZNF213O14771 459 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 NDC80O14777 642 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 GTF2A1P52655 376 aaPredicted RBP20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 KIF5AQ12840 1032 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 ERCC6LQ2NKX8 1250 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 EXOC1Q9NV70 894 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 SLC5A1P13866 664 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 CBX1P83916 185 aa20.61■□□□□ 0.89
CACNA1A-247ENST00000637769 UBA7P41226 1012 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 TXNDC16Q9P2K2 825 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 SULT6B1Q6IMI4 303 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 TACC1O75410 805 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 SPAG1Q07617 926 aa20.6■□□□□ 0.89
CACNA1A-247ENST00000637769 PSMC4P43686 418 aa20.59■□□□□ 0.89
CACNA1A-247ENST00000637769 TCERG1LQ5VWI1 586 aa20.59■□□□□ 0.89
CACNA1A-247ENST00000637769 ATP5DP30049 168 aa20.59■□□□□ 0.89
CACNA1A-247ENST00000637769 CCDC96Q2M329 555 aa20.59■□□□□ 0.89
CACNA1A-247ENST00000637769 ALDH1L2Q3SY69 923 aa20.59■□□□□ 0.89
CACNA1A-247ENST00000637769 GABPB2Q8TAK5 448 aaPredicted RBP20.59■□□□□ 0.89
CACNA1A-247ENST00000637769 CCDC82Q8N4S0 544 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms