RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 ALDH1L1O75891 902 aa21.07■□□□□ 0.96
CLCN2-220ENST00000637538 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
CLCN2-220ENST00000637538 BAG6P46379 1132 aa21.07■□□□□ 0.96
CLCN2-220ENST00000637538 PLBD2Q8NHP8 589 aa21.07■□□□□ 0.96
CLCN2-220ENST00000637538 USP44Q9H0E7 712 aa21.07■□□□□ 0.96
CLCN2-220ENST00000637538 TTLL7Q6ZT98 887 aa21.06■□□□□ 0.96
CLCN2-220ENST00000637538 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
CLCN2-220ENST00000637538 LINS1Q8NG48 757 aa21.06■□□□□ 0.96
CLCN2-220ENST00000637538 METTL22Q9BUU2 404 aaPredicted RBP21.06■□□□□ 0.96
CLCN2-220ENST00000637538 BCL11BQ9C0K0 894 aaPredicted RBP21.06■□□□□ 0.96
CLCN2-220ENST00000637538 C1orf115Q9H7X2 142 aa21.06■□□□□ 0.96
CLCN2-220ENST00000637538 RIC3Q7Z5B4 369 aa21.05■□□□□ 0.96
CLCN2-220ENST00000637538 RWDD1Q9H446 243 aaPredicted RBP21.05■□□□□ 0.96
CLCN2-220ENST00000637538 ZBTB1Q9Y2K1 713 aa21.05■□□□□ 0.96
CLCN2-220ENST00000637538 MYH14Q7Z406 1995 aaKnown RBP21.04■□□□□ 0.96
CLCN2-220ENST00000637538 IGKV5-2P06315 115 aa21.04■□□□□ 0.96
CLCN2-220ENST00000637538 GNAI3P08754 354 aa21.04■□□□□ 0.96
CLCN2-220ENST00000637538 INTS5Q6P9B9 1019 aaKnown RBP21.04■□□□□ 0.96
CLCN2-220ENST00000637538 SIRT2Q8IXJ6 389 aa21.04■□□□□ 0.96
CLCN2-220ENST00000637538 IL6STP40189 918 aaPredicted RBP21.03■□□□□ 0.96
CLCN2-220ENST00000637538 CRKLP46109 303 aaKnown RBP21.03■□□□□ 0.96
CLCN2-220ENST00000637538 CCDC87Q9NVE4 849 aa21.03■□□□□ 0.96
CLCN2-220ENST00000637538 APBA3O96018 575 aa21.02■□□□□ 0.96
CLCN2-220ENST00000637538 ANKRD44Q8N8A2 993 aa21.02■□□□□ 0.96
CLCN2-220ENST00000637538 UTYO14607 1347 aa21.01■□□□□ 0.95
CLCN2-220ENST00000637538 GNAI2P04899 355 aa21.01■□□□□ 0.95
CLCN2-220ENST00000637538 EIF5P55010 431 aaKnown RBP21.01■□□□□ 0.95
CLCN2-220ENST00000637538 CWF19L2Q2TBE0 894 aaKnown RBP21.01■□□□□ 0.95
CLCN2-220ENST00000637538 CEP85Q6P2H3 762 aa21.01■□□□□ 0.95
CLCN2-220ENST00000637538 NEURL1BA8MQ27 555 aa21■□□□□ 0.95
CLCN2-220ENST00000637538 EN1Q05925 392 aaPredicted RBP21■□□□□ 0.95
CLCN2-220ENST00000637538 RPAP2Q8IXW5 612 aaPredicted RBP21■□□□□ 0.95
CLCN2-220ENST00000637538 LINC00116Q8NCU8 138 aa21■□□□□ 0.95
CLCN2-220ENST00000637538 MYD88Q99836 296 aa21■□□□□ 0.95
CLCN2-220ENST00000637538 TAF1LQ8IZX4 1826 aa21■□□□□ 0.95
CLCN2-220ENST00000637538 NEXNQ0ZGT2 675 aa20.99■□□□□ 0.95
CLCN2-220ENST00000637538 CAMKK2Q96RR4 588 aa20.99■□□□□ 0.95
CLCN2-220ENST00000637538 CNTNAP4Q9C0A0 1308 aa20.99■□□□□ 0.95
CLCN2-220ENST00000637538 AFDNP55196 1824 aaKnown RBP20.99■□□□□ 0.95
CLCN2-220ENST00000637538 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
CLCN2-220ENST00000637538 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
CLCN2-220ENST00000637538 SMC5Q8IY18 1101 aa20.99■□□□□ 0.95
CLCN2-220ENST00000637538 MAP3K15Q6ZN16 1313 aa20.98■□□□□ 0.95
CLCN2-220ENST00000637538 PLSCR1O15162 318 aa20.98■□□□□ 0.95
CLCN2-220ENST00000637538 GCKRQ14397 625 aa20.98■□□□□ 0.95
CLCN2-220ENST00000637538 ZBTB3Q9H5J0 574 aa20.98■□□□□ 0.95
CLCN2-220ENST00000637538 TNS1Q9HBL0 1735 aaKnown RBP20.97■□□□□ 0.95
CLCN2-220ENST00000637538 GRM8O00222 908 aa20.96■□□□□ 0.95
CLCN2-220ENST00000637538 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
CLCN2-220ENST00000637538 KIF6Q6ZMV9 814 aa20.96■□□□□ 0.95
CLCN2-220ENST00000637538 CCNL1Q9UK58 526 aaPredicted RBP20.96■□□□□ 0.95
CLCN2-220ENST00000637538 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
CLCN2-220ENST00000637538 KCNQ4P56696 695 aa20.95■□□□□ 0.94
CLCN2-220ENST00000637538 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
CLCN2-220ENST00000637538 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
CLCN2-220ENST00000637538 ANKRD36CQ5JPF3 1778 aa20.95■□□□□ 0.94
CLCN2-220ENST00000637538 ERVV-1B6SEH8 477 aa20.94■□□□□ 0.94
CLCN2-220ENST00000637538 TRIM28Q13263 835 aaKnown RBP20.94■□□□□ 0.94
CLCN2-220ENST00000637538 GIGYF2Q6Y7W6 1299 aaKnown RBP20.94■□□□□ 0.94
CLCN2-220ENST00000637538 ZNF330Q9Y3S2 320 aaPredicted RBP20.94■□□□□ 0.94
CLCN2-220ENST00000637538 COL15A1P39059 1388 aa20.94■□□□□ 0.94
CLCN2-220ENST00000637538 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
CLCN2-220ENST00000637538 ATP8B2P98198 1209 aa20.94■□□□□ 0.94
CLCN2-220ENST00000637538 TCIRG1Q13488 830 aa20.94■□□□□ 0.94
CLCN2-220ENST00000637538 C9orf78Q9NZ63 289 aaPredicted RBP20.94■□□□□ 0.94
CLCN2-220ENST00000637538 C4BP0C0L5 1744 aa20.93■□□□□ 0.94
CLCN2-220ENST00000637538 NUP98P52948 1817 aa20.93■□□□□ 0.94
CLCN2-220ENST00000637538 DZIP3Q86Y13 1208 aaKnown RBP20.93■□□□□ 0.94
CLCN2-220ENST00000637538 GCC1Q96CN9 775 aa20.93■□□□□ 0.94
CLCN2-220ENST00000637538 KAZALD1Q96I82 304 aa20.93■□□□□ 0.94
CLCN2-220ENST00000637538 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 CASP7P55210 303 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 MTX1Q13505 466 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 HLFQ16534 295 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 SKAP1Q86WV1 359 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 CCDC191Q8NCU4 936 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 DCTPP1Q9H773 170 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 LRRC4BQ9NT99 713 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 HDAC5Q9UQL6 1122 aa20.92■□□□□ 0.94
CLCN2-220ENST00000637538 PDZRN3Q9UPQ7 1066 aa20.91■□□□□ 0.94
CLCN2-220ENST00000637538 PNMA6EA0A0J9YXQ4 647 aa20.9■□□□□ 0.94
CLCN2-220ENST00000637538 H7C1W4 665 aa20.9■□□□□ 0.94
CLCN2-220ENST00000637538 SLC27A3Q5K4L6 730 aa20.9■□□□□ 0.94
CLCN2-220ENST00000637538 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
CLCN2-220ENST00000637538 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
CLCN2-220ENST00000637538 CWC25Q9NXE8 425 aaPredicted RBP20.9■□□□□ 0.94
CLCN2-220ENST00000637538 TBC1D2BQ9UPU7 963 aa20.9■□□□□ 0.94
CLCN2-220ENST00000637538 HMMRO75330 724 aa20.89■□□□□ 0.94
CLCN2-220ENST00000637538 RPS6KA4O75676 772 aa20.89■□□□□ 0.94
CLCN2-220ENST00000637538 CAMTA2O94983 1202 aa20.89■□□□□ 0.94
CLCN2-220ENST00000637538 POLA2Q14181 598 aa20.89■□□□□ 0.94
CLCN2-220ENST00000637538 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.94
CLCN2-220ENST00000637538 SCN7AQ01118 1682 aa20.89■□□□□ 0.93
CLCN2-220ENST00000637538 NUCB1Q02818 461 aa20.88■□□□□ 0.93
CLCN2-220ENST00000637538 RGPD3A6NKT7 1758 aaPredicted RBP20.88■□□□□ 0.93
CLCN2-220ENST00000637538 RGPD4Q7Z3J3 1758 aa20.88■□□□□ 0.93
CLCN2-220ENST00000637538 A0A087WZG4 1122 aa20.88■□□□□ 0.93
CLCN2-220ENST00000637538 RGL2O15211 777 aa20.88■□□□□ 0.93
CLCN2-220ENST00000637538 NPM2Q86SE8 214 aaKnown RBP20.88■□□□□ 0.93
CLCN2-220ENST00000637538 PPP1R42Q7Z4L9 355 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms