RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
CLN5-217ENST00000637278 PXDNQ92626 1479 aa9.55□□□□□ -0.88
CLN5-217ENST00000637278 TBX4P57082 545 aa9.55□□□□□ -0.88
CLN5-217ENST00000637278 RHBDL3P58872 404 aa9.55□□□□□ -0.88
CLN5-217ENST00000637278 BORCS6Q96GS4 357 aa9.55□□□□□ -0.88
CLN5-217ENST00000637278 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
CLN5-217ENST00000637278 YTHDC2Q9H6S0 1430 aaKnown RBP9.55□□□□□ -0.88
CLN5-217ENST00000637278 RXRBP28702 533 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 DMTNQ08495 405 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
CLN5-217ENST00000637278 TAF3Q5VWG9 929 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 SGIP1Q9BQI5 828 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 ERBB3P21860 1342 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 DHX57Q6P158 1386 aaKnown RBP9.54□□□□□ -0.88
CLN5-217ENST00000637278 KRBA2Q6ZNG9 492 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 TSPAN18Q96SJ8 248 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 ANKARQ7Z5J8 1434 aa9.54□□□□□ -0.88
CLN5-217ENST00000637278 USP5P45974 858 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 CAMK2BQ13554 666 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 MPHOSPH6Q99547 160 aaKnown RBP9.53□□□□□ -0.88
CLN5-217ENST00000637278 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 AFF2P51816 1311 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 SF3A1Q15459 793 aaKnown RBP9.53□□□□□ -0.88
CLN5-217ENST00000637278 NBPF6Q5VWK0 638 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 NBPF5PQ86XG9 351 aaPredicted RBP9.53□□□□□ -0.88
CLN5-217ENST00000637278 DDX12PQ92771 950 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 NBPF4Q96M43 638 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 RPS6KC1Q96S38 1066 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 CHST12Q9NRB3 414 aa9.53□□□□□ -0.88
CLN5-217ENST00000637278 DDX46Q7L014 1031 aaKnown RBP9.52□□□□□ -0.89
CLN5-217ENST00000637278 JDP2Q8WYK2 163 aa9.52□□□□□ -0.89
CLN5-217ENST00000637278 NGLY1Q96IV0 654 aa9.52□□□□□ -0.89
CLN5-217ENST00000637278 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
CLN5-217ENST00000637278 RBM6P78332 1123 aaKnown RBP9.52□□□□□ -0.89
CLN5-217ENST00000637278 PRR7Q8TB68 274 aa9.52□□□□□ -0.89
CLN5-217ENST00000637278 IRF2BPLQ9H1B7 796 aa9.52□□□□□ -0.89
CLN5-217ENST00000637278 COL4A3BPQ9Y5P4 624 aa9.52□□□□□ -0.89
CLN5-217ENST00000637278 CCDC181Q5TID7 509 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 NBPF10Q6P3W6 841 aaKnown RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 FILIP1Q7Z7B0 1213 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 CAPN10Q9HC96 672 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 GNL3LQ9NVN8 582 aaKnown RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 IFT57Q9NWB7 429 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 CCDC61Q9Y6R9 512 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 NUTM2BA6NNL0 878 aaPredicted RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 NUTM2EB1AL46 878 aaPredicted RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 BDNFP23560 247 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 SSR1P43307 286 aaKnown RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 PLEKHG6Q3KR16 790 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 NUTM2AQ8IVF1 878 aaPredicted RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 C14orf93Q9H972 538 aaKnown RBP9.51□□□□□ -0.89
CLN5-217ENST00000637278 KIAA1210Q9ULL0 1709 aa9.51□□□□□ -0.89
CLN5-217ENST00000637278 ZNF280DQ6N043 979 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 PPP1R18Q6NYC8 613 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 YY1AP1Q9H869 796 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 METTL14Q9HCE5 456 aaKnown RBP9.5□□□□□ -0.89
CLN5-217ENST00000637278 RAB3GAP2Q9H2M9 1393 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 ITSN1Q15811 1721 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 IPO8O15397 1037 aaKnown RBP9.5□□□□□ -0.89
CLN5-217ENST00000637278 ATRNO75882 1429 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 FBXO33Q7Z6M2 555 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 SMC5Q8IY18 1101 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 DEPDC4Q8N2C3 294 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 NWD2Q9ULI1 1742 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 RGS12O14924 1447 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
CLN5-217ENST00000637278 SATB1Q01826 763 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 MFSD10Q14728 455 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 MAP9Q49MG5 647 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 EPS8L1Q8TE68 723 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 CABP2Q9NPB3 220 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 USP32Q8NFA0 1604 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 ADGRB1O14514 1584 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 SBNO1A3KN83 1393 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 KIF20AO95235 890 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 SDR16C5Q8N3Y7 309 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 KANSL2Q9H9L4 492 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 TRPC5Q9UL62 973 aaPredicted RBP9.49□□□□□ -0.89
CLN5-217ENST00000637278 PCDHGB7Q9Y5F8 929 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 ABCA3Q99758 1704 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 EPB41L2O43491 1005 aaKnown RBP9.49□□□□□ -0.89
CLN5-217ENST00000637278 MNX1P50219 401 aaPredicted RBP9.49□□□□□ -0.89
CLN5-217ENST00000637278 BIRC2Q13490 618 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.49□□□□□ -0.89
CLN5-217ENST00000637278 MRVI1Q9Y6F6 885 aa9.49□□□□□ -0.89
CLN5-217ENST00000637278 TNS3Q68CZ2 1445 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 ARHGEF10O15013 1369 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 WDR75Q8IWA0 830 aaKnown RBP9.48□□□□□ -0.89
CLN5-217ENST00000637278 AP1G2O75843 785 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 ABL1P00519 1130 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms