RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 LRRC8AQ8IWT6 810 aa9.21□□□□□ -0.93
SCN8A-212ENST00000636945 MRFAP1L1Q96HT8 127 aa9.21□□□□□ -0.93
SCN8A-212ENST00000636945 HMOX1P09601 288 aa9.21□□□□□ -0.94
SCN8A-212ENST00000636945 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.94
SCN8A-212ENST00000636945 FEZ2Q9UHY8 353 aaPredicted RBP9.21□□□□□ -0.94
SCN8A-212ENST00000636945 PXDNLA1KZ92 1463 aa9.21□□□□□ -0.94
SCN8A-212ENST00000636945 EDC4Q6P2E9 1401 aaKnown RBP9.21□□□□□ -0.94
SCN8A-212ENST00000636945 ZRANB2O95218 330 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 LARGE1O95461 756 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 CCT4P50991 539 aaKnown RBP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 RTF1Q92541 710 aaKnown RBP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 TM6SF1Q9BZW5 370 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 FAM83GA6ND36 823 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 LIG1P18858 919 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 CCZ1BP86790 482 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 CCZ1P86791 482 aaPredicted RBP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 IQCB1Q15051 598 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 NUP62CLQ9H1M0 184 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 USP27XA6NNY8 438 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 ATP8B2P98198 1209 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 THEMISQ8N1K5 641 aaPredicted RBP9.2□□□□□ -0.94
SCN8A-212ENST00000636945 NFATC2IPQ8NCF5 419 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 CLSTN2Q9H4D0 955 aa9.2□□□□□ -0.94
SCN8A-212ENST00000636945 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 VPS53Q5VIR6 699 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 PI4K2BQ8TCG2 481 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 SH2B1Q9NRF2 756 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 SMC3Q9UQE7 1217 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 USP42Q9H9J4 1324 aaKnown RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 KCNJ6P48051 423 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ANO6Q4KMQ2 910 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ZSCAN31Q96LW9 406 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ST7Q9NRC1 585 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 SOS1Q07889 1333 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ADCY9O60503 1353 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ALKQ9UM73 1620 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 GJB2P29033 226 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 PLA2G4AP47712 749 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 HNRNPH2P55795 449 aaKnown RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 BMS1Q14692 1282 aaKnown RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 TPD52L1Q16890 204 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-212ENST00000636945 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 SPATA31D1Q6ZQQ2 1576 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 AKAP12Q02952 1782 aa9.19□□□□□ -0.94
SCN8A-212ENST00000636945 SLU7O95391 586 aaKnown RBP9.18□□□□□ -0.94
SCN8A-212ENST00000636945 GNAI2P04899 355 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 ELF2Q15723 593 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 STAG3Q9UJ98 1225 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 NPHP3Q7Z494 1330 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 KIF2AO00139 706 aaPredicted RBP9.18□□□□□ -0.94
SCN8A-212ENST00000636945 APBB1O00213 710 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 CCAR2Q8N163 923 aaKnown RBP9.18□□□□□ -0.94
SCN8A-212ENST00000636945 CLIP2Q9UDT6 1046 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 EXOC6BQ9Y2D4 811 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 A2ML1A8K2U0 1454 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 PNMA6EA0A0J9YXQ4 647 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
SCN8A-212ENST00000636945 PLCB2Q00722 1185 aa9.18□□□□□ -0.94
SCN8A-212ENST00000636945 ALDH8A1Q9H2A2 487 aaPredicted RBP9.18□□□□□ -0.94
SCN8A-212ENST00000636945 NOL10Q9BSC4 688 aaKnown RBP9.17□□□□□ -0.94
SCN8A-212ENST00000636945 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 CABP1Q9NZU7 370 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 FBLN1P23142 703 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 RAD51AP2Q09MP3 1159 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 DCTN1Q14203 1278 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 PTPN14Q15678 1187 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 CACNA1FO60840 1977 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
SCN8A-212ENST00000636945 ATP8B1O43520 1251 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 PNMA6AP0CW24 399 aaPredicted RBP9.17□□□□□ -0.94
SCN8A-212ENST00000636945 KRT85P78386 507 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 TRIM5Q9C035 493 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 YY1AP1Q9H869 796 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 NALCNQ8IZF0 1738 aa9.17□□□□□ -0.94
SCN8A-212ENST00000636945 NCKAP5LQ9HCH0 1330 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 CPS1P31327 1500 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 TUBB4AP04350 444 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 CHGAP10645 457 aaKnown RBP9.16□□□□□ -0.94
SCN8A-212ENST00000636945 SSH3Q8TE77 659 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 RILPL2Q969X0 211 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 PRAM1Q96QH2 718 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 OSBPL5Q9H0X9 879 aaPredicted RBP9.16□□□□□ -0.94
SCN8A-212ENST00000636945 TNMDQ9H2S6 317 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 SLC52A1Q9NWF4 448 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 DACT1Q9NYF0 836 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 MAP3K5Q99683 1374 aa9.16□□□□□ -0.94
SCN8A-212ENST00000636945 MYH15Q9Y2K3 1946 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms