RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 SLC39A6Q13433 755 aa21.27■■□□□ 1
CACNA1A-229ENST00000636670 ERFEQ4G0M1 354 aa21.27■■□□□ 1
CACNA1A-229ENST00000636670 ZNF790Q6PG37 636 aa21.26■□□□□ 0.99
CACNA1A-229ENST00000636670 HEG1Q9ULI3 1381 aa21.25■□□□□ 0.99
CACNA1A-229ENST00000636670 BTBD11A6QL63 1104 aa21.25■□□□□ 0.99
CACNA1A-229ENST00000636670 MAP2K1Q02750 393 aaPredicted RBP21.25■□□□□ 0.99
CACNA1A-229ENST00000636670 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
CACNA1A-229ENST00000636670 ZPR1O75312 459 aa21.24■□□□□ 0.99
CACNA1A-229ENST00000636670 LDHDQ86WU2 507 aa21.24■□□□□ 0.99
CACNA1A-229ENST00000636670 RRP7AQ9Y3A4 280 aaKnown RBP21.23■□□□□ 0.99
CACNA1A-229ENST00000636670 SCN7AQ01118 1682 aa21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 H0YIN7 160 aa21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 DDNO94850 711 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 USPL1Q5W0Q7 1092 aa21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 C2CD5Q86YS7 1000 aa21.22■□□□□ 0.99
CACNA1A-229ENST00000636670 DLEC1Q9Y238 1755 aa21.21■□□□□ 0.99
CACNA1A-229ENST00000636670 DEFB115Q30KQ5 88 aa21.21■□□□□ 0.99
CACNA1A-229ENST00000636670 DIEXFQ68CQ4 756 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-229ENST00000636670 ZNF496Q96IT1 587 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-229ENST00000636670 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
CACNA1A-229ENST00000636670 THUMPD2Q9BTF0 503 aaKnown RBP21.21■□□□□ 0.99
CACNA1A-229ENST00000636670 BCORQ6W2J9 1755 aa21.2■□□□□ 0.99
CACNA1A-229ENST00000636670 RASSF10A6NK89 507 aa21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 CCER2I3L3R5 266 aa21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 APAF1O14727 1248 aa21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 ITGBL1O95965 494 aaPredicted RBP21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 NFIXQ14938 502 aa21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 TRIM35Q9UPQ4 493 aa21.2■□□□□ 0.98
CACNA1A-229ENST00000636670 DICER1Q9UPY3 1922 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-229ENST00000636670 DNAJC10Q8IXB1 793 aa21.19■□□□□ 0.98
CACNA1A-229ENST00000636670 SERPINB2P05120 415 aa21.18■□□□□ 0.98
CACNA1A-229ENST00000636670 INTS5Q6P9B9 1019 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-229ENST00000636670 BABAM1Q9NWV8 329 aa21.18■□□□□ 0.98
CACNA1A-229ENST00000636670 AFDNP55196 1824 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-229ENST00000636670 KCNQ3O43525 872 aa21.17■□□□□ 0.98
CACNA1A-229ENST00000636670 WDR33Q9C0J8 1336 aaKnown RBP21.17■□□□□ 0.98
CACNA1A-229ENST00000636670 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
CACNA1A-229ENST00000636670 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
CACNA1A-229ENST00000636670 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-229ENST00000636670 NCBP3Q53F19 620 aaKnown RBP21.16■□□□□ 0.98
CACNA1A-229ENST00000636670 TEX13AQ9BXU3 409 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-229ENST00000636670 TAF1DQ9H5J8 278 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-229ENST00000636670 C21orf2O43822 256 aa21.15■□□□□ 0.98
CACNA1A-229ENST00000636670 L3MBTL3Q96JM7 780 aaPredicted RBP21.15■□□□□ 0.98
CACNA1A-229ENST00000636670 TAOK3Q9H2K8 898 aa21.15■□□□□ 0.98
CACNA1A-229ENST00000636670 NARFQ9UHQ1 456 aa21.15■□□□□ 0.98
CACNA1A-229ENST00000636670 CALD1Q05682 793 aaKnown RBP21.14■□□□□ 0.97
CACNA1A-229ENST00000636670 CCDC27Q2M243 656 aa21.14■□□□□ 0.97
CACNA1A-229ENST00000636670 FAM9BQ8IZU0 186 aa21.14■□□□□ 0.97
CACNA1A-229ENST00000636670 BEGAINQ9BUH8 593 aa21.14■□□□□ 0.97
CACNA1A-229ENST00000636670 TSPYL4Q9UJ04 414 aa21.14■□□□□ 0.97
CACNA1A-229ENST00000636670 PDZRN3Q9UPQ7 1066 aa21.14■□□□□ 0.97
CACNA1A-229ENST00000636670 STARD3NLO95772 234 aa21.13■□□□□ 0.97
CACNA1A-229ENST00000636670 ZNF622Q969S3 477 aaKnown RBP eCLIP21.13■□□□□ 0.97
CACNA1A-229ENST00000636670 FER1L6Q2WGJ9 1857 aa21.13■□□□□ 0.97
CACNA1A-229ENST00000636670 SCN4AP35499 1836 aa21.13■□□□□ 0.97
CACNA1A-229ENST00000636670 COL15A1P39059 1388 aa21.12■□□□□ 0.97
CACNA1A-229ENST00000636670 SOS1Q07889 1333 aaPredicted RBP21.12■□□□□ 0.97
CACNA1A-229ENST00000636670 SNRPA1P09661 255 aaKnown RBP21.12■□□□□ 0.97
CACNA1A-229ENST00000636670 CFAP44Q96MT7 982 aa21.12■□□□□ 0.97
CACNA1A-229ENST00000636670 MIS18AQ9NYP9 233 aa21.12■□□□□ 0.97
CACNA1A-229ENST00000636670 ZNF219Q9P2Y4 722 aaPredicted RBP21.12■□□□□ 0.97
CACNA1A-229ENST00000636670 EIF4A1P60842 406 aaKnown RBP21.11■□□□□ 0.97
CACNA1A-229ENST00000636670 EAPPQ56P03 285 aaPredicted RBP21.11■□□□□ 0.97
CACNA1A-229ENST00000636670 CLEC11AQ9Y240 323 aa21.11■□□□□ 0.97
CACNA1A-229ENST00000636670 ZBTB1Q9Y2K1 713 aa21.11■□□□□ 0.97
CACNA1A-229ENST00000636670 ABT1Q9ULW3 272 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-229ENST00000636670 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
CACNA1A-229ENST00000636670 CHL1O00533 1208 aa21.09■□□□□ 0.97
CACNA1A-229ENST00000636670 PDE6BP35913 854 aa21.09■□□□□ 0.97
CACNA1A-229ENST00000636670 CNTROBQ8N137 903 aa21.09■□□□□ 0.97
CACNA1A-229ENST00000636670 NGEFQ8N5V2 710 aa21.09■□□□□ 0.97
CACNA1A-229ENST00000636670 BCL2L12Q9HB09 334 aa21.09■□□□□ 0.97
CACNA1A-229ENST00000636670 IFT57Q9NWB7 429 aa21.09■□□□□ 0.97
CACNA1A-229ENST00000636670 PDE4DIPQ5VU43 2346 aa21.07■□□□□ 0.96
CACNA1A-229ENST00000636670 PNMA8AQ86V59 439 aaPredicted RBP21.07■□□□□ 0.96
CACNA1A-229ENST00000636670 BRIP1Q9BX63 1249 aa21.07■□□□□ 0.96
CACNA1A-229ENST00000636670 HACL1Q9UJ83 578 aa21.07■□□□□ 0.96
CACNA1A-229ENST00000636670 PRAMEF22A3QJZ6 481 aa21.06■□□□□ 0.96
CACNA1A-229ENST00000636670 ZNF853P0CG23 659 aa21.06■□□□□ 0.96
CACNA1A-229ENST00000636670 ECE1P42892 770 aa21.06■□□□□ 0.96
CACNA1A-229ENST00000636670 GNAI1P63096 354 aa21.06■□□□□ 0.96
CACNA1A-229ENST00000636670 SOGA3Q5TF21 947 aa21.06■□□□□ 0.96
CACNA1A-229ENST00000636670 WWC1Q8IX03 1113 aa21.06■□□□□ 0.96
CACNA1A-229ENST00000636670 EPHX2P34913 555 aa21.05■□□□□ 0.96
CACNA1A-229ENST00000636670 IL6STP40189 918 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-229ENST00000636670 MAP1SQ66K74 1059 aaPredicted RBP21.05■□□□□ 0.96
CACNA1A-229ENST00000636670 MCOLN1Q9GZU1 580 aa21.05■□□□□ 0.96
CACNA1A-229ENST00000636670 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
CACNA1A-229ENST00000636670 IL16Q14005 1332 aa21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 EIF5P55010 431 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 MIER1Q8N108 512 aa21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 CNKSR1Q969H4 720 aa21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 GPR101Q96P66 508 aaPredicted RBP21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 LAS1LQ9Y4W2 734 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
CACNA1A-229ENST00000636670 NUP98P52948 1817 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms