RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 ARID3AQ99856 593 aa8.16□□□□□ -1.1
CLN5-212ENST00000636602 DOLKQ9UPQ8 538 aa8.16□□□□□ -1.1
CLN5-212ENST00000636602 UBTFP17480 764 aaKnown RBP8.15□□□□□ -1.1
CLN5-212ENST00000636602 SMTNP53814 917 aa8.15□□□□□ -1.1
CLN5-212ENST00000636602 GDF10P55107 478 aa8.15□□□□□ -1.1
CLN5-212ENST00000636602 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
CLN5-212ENST00000636602 TNFRSF25Q93038 417 aa8.15□□□□□ -1.1
CLN5-212ENST00000636602 ARID3CA6NKF2 412 aa8.14□□□□□ -1.11
CLN5-212ENST00000636602 SELPP16109 830 aa8.14□□□□□ -1.11
CLN5-212ENST00000636602 PHTF2Q8N3S3 785 aa8.14□□□□□ -1.11
CLN5-212ENST00000636602 APBB1O00213 710 aa8.13□□□□□ -1.11
CLN5-212ENST00000636602 MCM6Q14566 821 aa8.13□□□□□ -1.11
CLN5-212ENST00000636602 TP53INP1Q96A56 240 aa8.13□□□□□ -1.11
CLN5-212ENST00000636602 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
CLN5-212ENST00000636602 KRTAP4-7Q9BYR0 210 aa8.13□□□□□ -1.11
CLN5-212ENST00000636602 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
CLN5-212ENST00000636602 COBLO75128 1261 aa8.12□□□□□ -1.11
CLN5-212ENST00000636602 ELNP15502 786 aa8.12□□□□□ -1.11
CLN5-212ENST00000636602 BICDL1Q6ZP65 573 aa8.12□□□□□ -1.11
CLN5-212ENST00000636602 SIRT1Q96EB6 747 aa8.12□□□□□ -1.11
CLN5-212ENST00000636602 IQSEC3Q9UPP2 1182 aaPredicted RBP8.12□□□□□ -1.11
CLN5-212ENST00000636602 CDK2AP1O14519 115 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 PAX4O43316 350 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 NRG1Q02297 640 aaPredicted RBP8.11□□□□□ -1.11
CLN5-212ENST00000636602 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 LCE1DQ5T752 114 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 C20orf204Q6ZNR8 217 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 LENG1Q96BZ8 264 aaPredicted RBP8.11□□□□□ -1.11
CLN5-212ENST00000636602 RNF112Q9ULX5 631 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 NDUFB9Q9Y6M9 179 aa8.11□□□□□ -1.11
CLN5-212ENST00000636602 COL17A1Q9UMD9 1497 aaPredicted RBP8.11□□□□□ -1.11
CLN5-212ENST00000636602 A6NJR5 290 aa8.1□□□□□ -1.11
CLN5-212ENST00000636602 TXKP42681 527 aa8.1□□□□□ -1.11
CLN5-212ENST00000636602 CABP1Q9NZU7 370 aa8.1□□□□□ -1.11
CLN5-212ENST00000636602 A0A0A0MRY4 1105 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 ADH7P40394 386 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 MTFR1Q15390 333 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 SLC4A9Q96Q91 983 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 SSBP4Q9BWG4 385 aaPredicted RBP8.09□□□□□ -1.11
CLN5-212ENST00000636602 SERTAD1Q9UHV2 236 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 USP3Q9Y6I4 520 aa8.09□□□□□ -1.11
CLN5-212ENST00000636602 A6NJY4 79 aa8.08□□□□□ -1.12
CLN5-212ENST00000636602 SOCS7O14512 581 aa8.08□□□□□ -1.12
CLN5-212ENST00000636602 YBX3P16989 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
CLN5-212ENST00000636602 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
CLN5-212ENST00000636602 SHISA2Q6UWI4 295 aa8.08□□□□□ -1.12
CLN5-212ENST00000636602 CHIC2Q9UKJ5 165 aa8.08□□□□□ -1.12
CLN5-212ENST00000636602 LILRB5O75023 590 aa8.07□□□□□ -1.12
CLN5-212ENST00000636602 SFSWAPQ12872 951 aaKnown RBP8.07□□□□□ -1.12
CLN5-212ENST00000636602 FMNL2Q96PY5 1086 aa8.07□□□□□ -1.12
CLN5-212ENST00000636602 RAD21O60216 631 aa8.06□□□□□ -1.12
CLN5-212ENST00000636602 TXLNAP40222 546 aa8.06□□□□□ -1.12
CLN5-212ENST00000636602 MTMR14Q8NCE2 650 aa8.06□□□□□ -1.12
CLN5-212ENST00000636602 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
CLN5-212ENST00000636602 TMEM229AB2RXF0 380 aa8.05□□□□□ -1.12
CLN5-212ENST00000636602 RAC1P63000 192 aa8.05□□□□□ -1.12
CLN5-212ENST00000636602 LRRC69Q6ZNQ3 347 aa8.05□□□□□ -1.12
CLN5-212ENST00000636602 PROSER2Q86WR7 435 aaPredicted RBP8.05□□□□□ -1.12
CLN5-212ENST00000636602 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
CLN5-212ENST00000636602 NEUROD1Q13562 356 aa8.04□□□□□ -1.12
CLN5-212ENST00000636602 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
CLN5-212ENST00000636602 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
CLN5-212ENST00000636602 USP21Q9UK80 565 aa8.04□□□□□ -1.12
CLN5-212ENST00000636602 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLN5-212ENST00000636602 RAB44Q7Z6P3 723 aaPredicted RBP8.03□□□□□ -1.12
CLN5-212ENST00000636602 CCDC82Q8N4S0 544 aa8.02□□□□□ -1.13
CLN5-212ENST00000636602 EML1O00423 815 aa8.01□□□□□ -1.13
CLN5-212ENST00000636602 ZDHHC1Q8WTX9 485 aa8.01□□□□□ -1.13
CLN5-212ENST00000636602 NEUROD4Q9HD90 331 aa8.01□□□□□ -1.13
CLN5-212ENST00000636602 SNRKQ9NRH2 765 aa8.01□□□□□ -1.13
CLN5-212ENST00000636602 PCMTD2Q9NV79 361 aa8.01□□□□□ -1.13
CLN5-212ENST00000636602 ZNF777Q9ULD5 760 aaPredicted RBP8.01□□□□□ -1.13
CLN5-212ENST00000636602 FMR1NBQ8N0W7 255 aaPredicted RBP8□□□□□ -1.13
CLN5-212ENST00000636602 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
CLN5-212ENST00000636602 L3MBTL2Q969R5 705 aa8□□□□□ -1.13
CLN5-212ENST00000636602 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
CLN5-212ENST00000636602 COG6Q9Y2V7 657 aa7.99□□□□□ -1.13
CLN5-212ENST00000636602 GPC6Q9Y625 555 aaPredicted RBP7.99□□□□□ -1.13
CLN5-212ENST00000636602 TEAD4Q15561 434 aa7.98□□□□□ -1.13
CLN5-212ENST00000636602 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
CLN5-212ENST00000636602 FNBP4Q8N3X1 1017 aaPredicted RBP7.98□□□□□ -1.13
CLN5-212ENST00000636602 JPH1Q9HDC5 661 aaPredicted RBP7.98□□□□□ -1.13
CLN5-212ENST00000636602 NOS2P35228 1153 aa7.97□□□□□ -1.13
CLN5-212ENST00000636602 WFDC12Q8WWY7 111 aa7.97□□□□□ -1.13
CLN5-212ENST00000636602 SCHIP1Q9P0W5 487 aaPredicted RBP7.97□□□□□ -1.13
CLN5-212ENST00000636602 IRAK1P51617 712 aa7.96□□□□□ -1.14
CLN5-212ENST00000636602 AFF1P51825 1210 aaKnown RBP7.96□□□□□ -1.14
CLN5-212ENST00000636602 KCNQ4P56696 695 aa7.96□□□□□ -1.14
CLN5-212ENST00000636602 DMRTC2Q8IXT2 367 aaPredicted RBP7.96□□□□□ -1.14
CLN5-212ENST00000636602 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.14
CLN5-212ENST00000636602 NUDT8Q8WV74 236 aa7.96□□□□□ -1.14
CLN5-212ENST00000636602 BRD7Q9NPI1 651 aa7.96□□□□□ -1.14
CLN5-212ENST00000636602 BACH1O14867 736 aa7.95□□□□□ -1.14
CLN5-212ENST00000636602 SSTR4P31391 388 aa7.95□□□□□ -1.14
CLN5-212ENST00000636602 IREB2P48200 963 aaKnown RBP7.95□□□□□ -1.14
CLN5-212ENST00000636602 FZD5Q13467 585 aa7.95□□□□□ -1.14
CLN5-212ENST00000636602 PRR23CQ6ZRP0 262 aa7.95□□□□□ -1.14
CLN5-212ENST00000636602 CCDC97Q96F63 343 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms