RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ADGRE1Q14246 886 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 SAMD5Q5TGI4 173 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 MCTP1Q6DN14 999 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 TXNRD3Q86VQ6 643 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 ZNF295-AS1Q8N0V1 137 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 SIRT1Q96EB6 747 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 MDFIQ99750 246 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 IGFLR1Q9H665 355 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 NEUROD4Q9HD90 331 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 PRDM6Q9NQX0 595 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 SNRKQ9NRH2 765 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 ZDHHC3Q9NYG2 299 aa2.88□□□□□ -1.95
SMARCB1-209ENST00000635578 A0A0A0MRY4 1105 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 A6NJY4 79 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 ADARB2-AS1A8MUL3 147 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 LILRB5O75023 590 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 COBLO75128 1261 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 ELNP15502 786 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 RAC1P63000 192 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 EIF4G2P78344 907 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 NRG1Q02297 640 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 TBCELQ5QJ74 424 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 PHTF2Q8N3S3 785 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 IL27Q8NEV9 243 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 NUDT8Q8WV74 236 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 PCMTD2Q9NV79 361 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 ZNF232Q9UNY5 417 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 IQSEC3Q9UPP2 1182 aaPredicted RBP2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 TBC1D2BQ9UPU7 963 aa2.87□□□□□ -1.95
SMARCB1-209ENST00000635578 TMEM229AB2RXF0 380 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 APBB1O00213 710 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 PSME1Q06323 249 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 NEUROD1Q13562 356 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 PLPP7Q8NBV4 271 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 ZDHHC1Q8WTX9 485 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 TNFRSF25Q93038 417 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 BHMTQ93088 406 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 L3MBTL2Q969R5 705 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 GOPCQ9HD26 462 aa2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 JPH1Q9HDC5 661 aaPredicted RBP2.86□□□□□ -1.95
SMARCB1-209ENST00000635578 PAX4O43316 350 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 SSTR4P31391 388 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 VAC14Q08AM6 782 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 SH3PXD2AQ5TCZ1 1133 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 C20orf204Q6ZNR8 217 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 DMRTC2Q8IXT2 367 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 BANK1Q8NDB2 785 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 RHPN1Q8TCX5 695 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 LENG1Q96BZ8 264 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 HSH2DQ96JZ2 352 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 CEP63Q96MT8 703 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 SLC4A9Q96Q91 983 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 UBE2OQ9C0C9 1292 aaKnown RBP2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 BRD7Q9NPI1 651 aa2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 SCHIP1Q9P0W5 487 aaPredicted RBP2.85□□□□□ -1.95
SMARCB1-209ENST00000635578 SOCS7O14512 581 aa2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 IREB2P48200 963 aaKnown RBP2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 MTFR1Q15390 333 aa2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 SLC9A9Q8IVB4 645 aa2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 SSBP4Q9BWG4 385 aaPredicted RBP2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 RNF112Q9ULX5 631 aa2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 SLC6A14Q9UN76 642 aa2.84□□□□□ -1.95
SMARCB1-209ENST00000635578 SERTM1A2A2V5 107 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 SFI1A8K8P3 1242 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 PIK3CDO00329 1044 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 EML1O00423 815 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 BACH1O14867 736 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 YBX3P16989 372 aaKnown RBP eCLIP2.83□□□□□ -1.963e-8■■■□□ 18.7
SMARCB1-209ENST00000635578 NOS2P35228 1153 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 TXKP42681 527 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 AFF1P51825 1210 aaKnown RBP2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 IRF5Q13568 498 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 TEAD4Q15561 434 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 NEUROD2Q15784 382 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 MAP7D1Q3KQU3 841 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 PSAPL1Q6NUJ1 521 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 TNS4Q8IZW8 715 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 FMR1NBQ8N0W7 255 aaPredicted RBP2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 WFDC12Q8WWY7 111 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 ZNF358Q9NW07 568 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 NAGPAQ9UK23 515 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 CHIC2Q9UKJ5 165 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 KCNH4Q9UQ05 1017 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 PCDHGA11Q9Y5H2 935 aa2.83□□□□□ -1.96
SMARCB1-209ENST00000635578 RGS9O75916 674 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 NOS3P29474 1203 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 ABL2P42684 1182 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 IRAK1P51617 712 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 GTF2IP78347 998 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 TYRO3Q06418 890 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 SEMA3FQ13275 785 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 ZNF280CQ8ND82 737 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 MEGF10Q96KG7 1140 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 DNAJB12Q9NXW2 375 aaKnown RBP2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 HCN4Q9Y3Q4 1203 aa2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 COL17A1Q9UMD9 1497 aaPredicted RBP2.82□□□□□ -1.96
SMARCB1-209ENST00000635578 CPB1P15086 417 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 NFKB1P19838 968 aa2.81□□□□□ -1.96
SMARCB1-209ENST00000635578 FSTP19883 344 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms