RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SNRKQ9NRH2 765 aa5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 MTFR1Q15390 333 aa5.67□□□□□ -1.5
SMARCB1-208ENST00000634926 ZDHHC3Q9NYG2 299 aa5.67□□□□□ -1.5
SMARCB1-208ENST00000634926 ZNF330Q9Y3S2 320 aaPredicted RBP5.67□□□□□ -1.5
SMARCB1-208ENST00000634926 LAMC2Q13753 1193 aa5.66□□□□□ -1.5
SMARCB1-208ENST00000634926 TXNRD3Q86VQ6 643 aa5.66□□□□□ -1.5
SMARCB1-208ENST00000634926 TNFRSF25Q93038 417 aa5.66□□□□□ -1.5
SMARCB1-208ENST00000634926 TP53INP1Q96A56 240 aa5.66□□□□□ -1.5
SMARCB1-208ENST00000634926 SLC4A9Q96Q91 983 aa5.66□□□□□ -1.5
SMARCB1-208ENST00000634926 A0A0A0MRY4 1105 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 A6NJY4 79 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 C9orf172C9J069 976 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 CDK2AP1O14519 115 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 ADH7P40394 386 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 NBPF1Q3BBV0 1214 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 LRRC69Q6ZNQ3 347 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 ILDR2Q71H61 639 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 PCMTD1Q96MG8 357 aaPredicted RBP5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 NACC1Q96RE7 527 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 GOPCQ9HD26 462 aa5.65□□□□□ -1.5
SMARCB1-208ENST00000634926 TATP17735 454 aaPredicted RBP5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 TRAPPC3LQ5T215 181 aa5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 SH3PXD2AQ5TCZ1 1133 aa5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 ZNF592Q92610 1267 aa5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 LENG1Q96BZ8 264 aaPredicted RBP5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 CABP1Q9NZU7 370 aa5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 GJA3Q9Y6H8 435 aa5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 NDUFB9Q9Y6M9 179 aa5.64□□□□□ -1.51
SMARCB1-208ENST00000634926 IRF5Q13568 498 aa5.63□□□□□ -1.51
SMARCB1-208ENST00000634926 BICDL1Q6ZP65 573 aa5.63□□□□□ -1.51
SMARCB1-208ENST00000634926 SOCS7O14512 581 aa5.62□□□□□ -1.51
SMARCB1-208ENST00000634926 ELNP15502 786 aa5.62□□□□□ -1.51
SMARCB1-208ENST00000634926 COL17A1Q9UMD9 1497 aaPredicted RBP5.62□□□□□ -1.51
SMARCB1-208ENST00000634926 EML1O00423 815 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 SPEM2Q0P670 501 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 SLFNL1Q499Z3 407 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 TBCELQ5QJ74 424 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 RNF112Q9ULX5 631 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 TBC1D2BQ9UPU7 963 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 PCDHGA11Q9Y5H2 935 aa5.61□□□□□ -1.51
SMARCB1-208ENST00000634926 L3MBTL2Q969R5 705 aa5.6□□□□□ -1.51
SMARCB1-208ENST00000634926 FMNL2Q96PY5 1086 aa5.6□□□□□ -1.51
SMARCB1-208ENST00000634926 LILRB5O75023 590 aa5.59□□□□□ -1.51
SMARCB1-208ENST00000634926 BANK1Q8NDB2 785 aa5.59□□□□□ -1.51
SMARCB1-208ENST00000634926 NUDT8Q8WV74 236 aa5.59□□□□□ -1.51
SMARCB1-208ENST00000634926 SCHIP1Q9P0W5 487 aaPredicted RBP5.59□□□□□ -1.51
SMARCB1-208ENST00000634926 MED26O95402 600 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 AFF1P51825 1210 aaKnown RBP5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 EPHA4P54764 986 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 DMRTC2Q8IXT2 367 aaPredicted RBP5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 FMR1NBQ8N0W7 255 aaPredicted RBP5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 PLPP7Q8NBV4 271 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 IL27Q8NEV9 243 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 HSH2DQ96JZ2 352 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 MEGF10Q96KG7 1140 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 KRTAP4-9Q9BYQ8 210 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 NAGPAQ9UK23 515 aa5.58□□□□□ -1.52
SMARCB1-208ENST00000634926 NOS3P29474 1203 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 NOS2P35228 1153 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 IREB2P48200 963 aaKnown RBP5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 VAC14Q08AM6 782 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 TEAD4Q15561 434 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 ZNF280CQ8ND82 737 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 WFDC12Q8WWY7 111 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 SIRT1Q96EB6 747 aa5.57□□□□□ -1.52
SMARCB1-208ENST00000634926 PIK3CDO00329 1044 aa5.56□□□□□ -1.52
SMARCB1-208ENST00000634926 COBLO75128 1261 aa5.56□□□□□ -1.52
SMARCB1-208ENST00000634926 PLAURQ03405 335 aa5.56□□□□□ -1.52
SMARCB1-208ENST00000634926 JPH1Q9HDC5 661 aaPredicted RBP5.56□□□□□ -1.52
SMARCB1-208ENST00000634926 USP21Q9UK80 565 aa5.56□□□□□ -1.52
SMARCB1-208ENST00000634926 SLC6A14Q9UN76 642 aa5.56□□□□□ -1.52
SMARCB1-208ENST00000634926 SSTR4P31391 388 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 KCNQ4P56696 695 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 EIF4G2P78344 907 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 TBC1D8BQ0IIM8 1120 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 TNS4Q8IZW8 715 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 BHMTQ93088 406 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 BRD7Q9NPI1 651 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 ZNF358Q9NW07 568 aa5.55□□□□□ -1.52
SMARCB1-208ENST00000634926 ADAMTS4O75173 837 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 RAC1P63000 192 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 TYRO3Q06418 890 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 SLC9A9Q8IVB4 645 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 CEP63Q96MT8 703 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 IGFLR1Q9H665 355 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 PCMTD2Q9NV79 361 aa5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 OAS3Q9Y6K5 1087 aaKnown RBP5.54□□□□□ -1.52
SMARCB1-208ENST00000634926 SFI1A8K8P3 1242 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 PAX4O43316 350 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 CD97P48960 835 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 GRIK5Q16478 980 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 MAP7D1Q3KQU3 841 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 PSAPL1Q6NUJ1 521 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 PRR23CQ6ZRP0 262 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 KCNH4Q9UQ05 1017 aa5.53□□□□□ -1.52
SMARCB1-208ENST00000634926 TAL1P17542 331 aaPredicted RBP5.52□□□□□ -1.53
SMARCB1-208ENST00000634926 TXKP42681 527 aa5.52□□□□□ -1.53
SMARCB1-208ENST00000634926 RHPN1Q8TCX5 695 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms