RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 U2AF1Q01081 240 aaKnown RBP eCLIP20.69■□□□□ 0.9
SNRNP48-203ENST00000634363 CEMIPQ8WUJ3 1361 aa20.69■□□□□ 0.9
SNRNP48-203ENST00000634363 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
SNRNP48-203ENST00000634363 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
SNRNP48-203ENST00000634363 MCM10Q7L590 875 aa20.68■□□□□ 0.9
SNRNP48-203ENST00000634363 CNKSR1Q969H4 720 aa20.68■□□□□ 0.9
SNRNP48-203ENST00000634363 COL11A2P13942 1736 aaPredicted RBP20.67■□□□□ 0.9
SNRNP48-203ENST00000634363 FER1L6Q2WGJ9 1857 aa20.67■□□□□ 0.9
SNRNP48-203ENST00000634363 POTECB2RU33 542 aa20.67■□□□□ 0.9
SNRNP48-203ENST00000634363 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
SNRNP48-203ENST00000634363 DICER1Q9UPY3 1922 aaKnown RBP20.66■□□□□ 0.9
SNRNP48-203ENST00000634363 DCTN1Q14203 1278 aa20.66■□□□□ 0.9
SNRNP48-203ENST00000634363 COL13A1Q5TAT6 717 aaPredicted RBP20.66■□□□□ 0.9
SNRNP48-203ENST00000634363 STYK1Q6J9G0 422 aa20.66■□□□□ 0.9
SNRNP48-203ENST00000634363 TAOK3Q9H2K8 898 aa20.66■□□□□ 0.9
SNRNP48-203ENST00000634363 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
SNRNP48-203ENST00000634363 SRGNP10124 158 aa20.65■□□□□ 0.9
SNRNP48-203ENST00000634363 RALBP1Q15311 655 aa20.65■□□□□ 0.9
SNRNP48-203ENST00000634363 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
SNRNP48-203ENST00000634363 NBPF5PQ86XG9 351 aaPredicted RBP20.65■□□□□ 0.9
SNRNP48-203ENST00000634363 MASTLQ96GX5 879 aa20.65■□□□□ 0.9
SNRNP48-203ENST00000634363 FAM177BA6PVY3 158 aa20.64■□□□□ 0.89
SNRNP48-203ENST00000634363 DDNO94850 711 aaPredicted RBP20.63■□□□□ 0.89
SNRNP48-203ENST00000634363 ZNF652Q9Y2D9 606 aa20.63■□□□□ 0.89
SNRNP48-203ENST00000634363 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
SNRNP48-203ENST00000634363 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
SNRNP48-203ENST00000634363 LTBP3Q9NS15 1303 aa20.61■□□□□ 0.89
SNRNP48-203ENST00000634363 SOGA3Q5TF21 947 aa20.61■□□□□ 0.89
SNRNP48-203ENST00000634363 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
SNRNP48-203ENST00000634363 NIP7Q9Y221 180 aaKnown RBP eCLIP20.61■□□□□ 0.89
SNRNP48-203ENST00000634363 CAPN15O75808 1086 aa20.6■□□□□ 0.89
SNRNP48-203ENST00000634363 TPTE2Q6XPS3 522 aa20.6■□□□□ 0.89
SNRNP48-203ENST00000634363 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
SNRNP48-203ENST00000634363 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
SNRNP48-203ENST00000634363 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
SNRNP48-203ENST00000634363 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
SNRNP48-203ENST00000634363 POTEIP0CG38 1075 aa20.58■□□□□ 0.89
SNRNP48-203ENST00000634363 POTEJP0CG39 1038 aa20.58■□□□□ 0.89
SNRNP48-203ENST00000634363 NPR1P16066 1061 aa20.58■□□□□ 0.89
SNRNP48-203ENST00000634363 GTF2E1P29083 439 aaPredicted RBP20.58■□□□□ 0.89
SNRNP48-203ENST00000634363 TAF7Q15545 349 aaPredicted RBP20.58■□□□□ 0.89
SNRNP48-203ENST00000634363 CHADLQ6NUI6 762 aa20.58■□□□□ 0.89
SNRNP48-203ENST00000634363 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 HTATSF1O43719 755 aaKnown RBP20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 HSPA1AP0DMV8 641 aaKnown RBP20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 HSPA1BP0DMV9 641 aaKnown RBP20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 TNS4Q8IZW8 715 aa20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 ARFGEF2Q9Y6D5 1785 aa20.57■□□□□ 0.88
SNRNP48-203ENST00000634363 NEFMP07197 916 aa20.56■□□□□ 0.88
SNRNP48-203ENST00000634363 HLFQ16534 295 aa20.56■□□□□ 0.88
SNRNP48-203ENST00000634363 OLFM4Q6UX06 510 aa20.56■□□□□ 0.88
SNRNP48-203ENST00000634363 C7orf43Q8WVR3 580 aa20.56■□□□□ 0.88
SNRNP48-203ENST00000634363 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
SNRNP48-203ENST00000634363 MKRN1Q9UHC7 482 aaKnown RBP20.55■□□□□ 0.88
SNRNP48-203ENST00000634363 PRKRIP1Q9H875 184 aaPredicted RBP20.54■□□□□ 0.88
SNRNP48-203ENST00000634363 IQCA1LA6NCM1 817 aa20.53■□□□□ 0.88
SNRNP48-203ENST00000634363 FKBP4Q02790 459 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNRNP48-203ENST00000634363 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
SNRNP48-203ENST00000634363 KLRG2A4D1S0 409 aaPredicted RBP20.52■□□□□ 0.88
SNRNP48-203ENST00000634363 ALDH1B1P30837 517 aa20.52■□□□□ 0.88
SNRNP48-203ENST00000634363 EAPPQ56P03 285 aaPredicted RBP20.52■□□□□ 0.88
SNRNP48-203ENST00000634363 RTKN2Q8IZC4 609 aa20.52■□□□□ 0.88
SNRNP48-203ENST00000634363 CREBZFQ9NS37 354 aa20.52■□□□□ 0.88
SNRNP48-203ENST00000634363 CLEC11AQ9Y240 323 aa20.52■□□□□ 0.88
SNRNP48-203ENST00000634363 NUTM1Q86Y26 1132 aa20.51■□□□□ 0.87
SNRNP48-203ENST00000634363 TAF1DQ9H5J8 278 aaPredicted RBP20.51■□□□□ 0.87
SNRNP48-203ENST00000634363 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
SNRNP48-203ENST00000634363 SYNE4Q8N205 404 aa20.5■□□□□ 0.87
SNRNP48-203ENST00000634363 SCN4AP35499 1836 aa20.49■□□□□ 0.87
SNRNP48-203ENST00000634363 MYL6BP14649 208 aa20.49■□□□□ 0.87
SNRNP48-203ENST00000634363 LDHDQ86WU2 507 aa20.49■□□□□ 0.87
SNRNP48-203ENST00000634363 PNISRQ8TF01 805 aaKnown RBP20.49■□□□□ 0.87
SNRNP48-203ENST00000634363 ZNF541Q9H0D2 1346 aa20.49■□□□□ 0.87
SNRNP48-203ENST00000634363 RGL2O15211 777 aa20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 KIF6Q6ZMV9 814 aa20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 L3MBTL3Q96JM7 780 aaPredicted RBP20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 THUMPD2Q9BTF0 503 aaKnown RBP20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 NYXQ9GZU5 481 aa20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 NUP98P52948 1817 aa20.48■□□□□ 0.87
SNRNP48-203ENST00000634363 ANP32CO43423 234 aa20.47■□□□□ 0.87
SNRNP48-203ENST00000634363 GPTP24298 496 aa20.47■□□□□ 0.87
SNRNP48-203ENST00000634363 TTLL7Q6ZT98 887 aa20.47■□□□□ 0.87
SNRNP48-203ENST00000634363 HACL1Q9UJ83 578 aa20.47■□□□□ 0.87
SNRNP48-203ENST00000634363 LAMB4A4D0S4 1761 aa20.46■□□□□ 0.87
SNRNP48-203ENST00000634363 ERVV-1B6SEH8 477 aa20.46■□□□□ 0.87
SNRNP48-203ENST00000634363 EPHX2P34913 555 aa20.46■□□□□ 0.87
SNRNP48-203ENST00000634363 EIF4A1P60842 406 aaKnown RBP20.46■□□□□ 0.87
SNRNP48-203ENST00000634363 ZBTB3Q9H5J0 574 aa20.46■□□□□ 0.87
SNRNP48-203ENST00000634363 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
SNRNP48-203ENST00000634363 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
SNRNP48-203ENST00000634363 JDP2Q8WYK2 163 aa20.45■□□□□ 0.86
SNRNP48-203ENST00000634363 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
SNRNP48-203ENST00000634363 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
SNRNP48-203ENST00000634363 PCNTO95613 3336 aa20.45■□□□□ 0.86
SNRNP48-203ENST00000634363 NFE2L2Q16236 605 aa20.44■□□□□ 0.86
SNRNP48-203ENST00000634363 PASKQ96RG2 1323 aa20.44■□□□□ 0.86
SNRNP48-203ENST00000634363 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
SNRNP48-203ENST00000634363 TMEM88BA6NKF7 163 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms