RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MYL6BP14649 208 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 NBPF14Q5TI25 921 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 NBPF10Q6P3W6 841 aaKnown RBP6.83□□□□□ -1.32
NEK3-211ENST00000629912 NBPF15Q8N660 670 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 SUCLG2Q96I99 432 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 MYD88Q99836 296 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 DISP2A7MBM2 1401 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 TNS2Q63HR2 1409 aa6.83□□□□□ -1.32
NEK3-211ENST00000629912 TTC41PQ6P2S7 1318 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 KCPQ6ZWJ8 1503 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 H7C1W4 665 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 EXOC5O00471 708 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 CHMLP26374 656 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 CASP7P55210 303 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 TRIM28Q13263 835 aaKnown RBP6.82□□□□□ -1.32
NEK3-211ENST00000629912 RABL6Q3YEC7 729 aaPredicted RBP6.82□□□□□ -1.32
NEK3-211ENST00000629912 CLASRPQ8N2M8 674 aaKnown RBP6.82□□□□□ -1.32
NEK3-211ENST00000629912 PI4K2BQ8TCG2 481 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 IL17RAQ96F46 866 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 BICC1Q9H694 974 aaKnown RBP6.82□□□□□ -1.32
NEK3-211ENST00000629912 COPRSQ9NQ92 184 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 THRAP3Q9Y2W1 955 aaKnown RBP6.82□□□□□ -1.32
NEK3-211ENST00000629912 ITGB4P16144 1822 aa6.82□□□□□ -1.32
NEK3-211ENST00000629912 AFDNP55196 1824 aaKnown RBP6.81□□□□□ -1.32
NEK3-211ENST00000629912 GLRX3O76003 335 aaKnown RBP6.81□□□□□ -1.32
NEK3-211ENST00000629912 A1BGP04217 495 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 G3BP1Q13283 466 aaKnown RBP eCLIP6.81□□□□□ -1.32
NEK3-211ENST00000629912 RABEP1Q15276 862 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 NFKBIBQ15653 356 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 NUTM1Q86Y26 1132 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 HSCBQ8IWL3 235 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 PIGBQ92521 554 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 ESYT1Q9BSJ8 1104 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 IL1RAPL2Q9NP60 686 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 TMOD3Q9NYL9 352 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 ARFGEF2Q9Y6D5 1785 aa6.81□□□□□ -1.32
NEK3-211ENST00000629912 LRP6O75581 1613 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 COL16A1Q07092 1604 aaPredicted RBP6.8□□□□□ -1.32
NEK3-211ENST00000629912 AK9Q5TCS8 1911 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 TOM1O60784 492 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 SASH1O94885 1247 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 DDIT3P35638 169 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 RFX5P48382 616 aaPredicted RBP6.8□□□□□ -1.32
NEK3-211ENST00000629912 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
NEK3-211ENST00000629912 NBR1Q14596 966 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 RTL5Q5HYW3 569 aaPredicted RBP6.8□□□□□ -1.32
NEK3-211ENST00000629912 CCDC191Q8NCU4 936 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 ECHDC1Q9NTX5 307 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 CHMP5Q9NZZ3 219 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
NEK3-211ENST00000629912 TOGARAM1Q9Y4F4 1720 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 PLCH1Q4KWH8 1693 aa6.8□□□□□ -1.32
NEK3-211ENST00000629912 PHLPP1O60346 1717 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 NUP188Q5SRE5 1749 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 BCL9O00512 1426 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 A0A087WZG4 1122 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 TRIM6-TRIM34B2RNG4 842 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 PTCD1O75127 700 aaKnown RBP6.79□□□□□ -1.32
NEK3-211ENST00000629912 STARD3NLO95772 234 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 IFIT2P09913 472 aaKnown RBP6.79□□□□□ -1.32
NEK3-211ENST00000629912 ANAPC15P60006 121 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 FOXO4P98177 505 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 TCIRG1Q13488 830 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 EPHA10Q5JZY3 1008 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 TICAM2Q86XR7 235 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 CNTROBQ8N137 903 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 RILPL2Q969X0 211 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 GPATCH3Q96I76 525 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 ISCA1Q9BUE6 129 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 CWC25Q9NXE8 425 aaPredicted RBP6.79□□□□□ -1.32
NEK3-211ENST00000629912 ASAP1Q9ULH1 1129 aa6.79□□□□□ -1.32
NEK3-211ENST00000629912 PA2G4Q9UQ80 394 aaKnown RBP6.79□□□□□ -1.32
NEK3-211ENST00000629912 SPATA31A1Q5TZJ5 1347 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 WNK3Q9BYP7 1800 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
NEK3-211ENST00000629912 PIP4K2AP48426 406 aaPredicted RBP6.78□□□□□ -1.32
NEK3-211ENST00000629912 PTPN12Q05209 780 aaKnown RBP6.78□□□□□ -1.32
NEK3-211ENST00000629912 TSHZ3Q63HK5 1081 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 BARGINQ6ZT62 677 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 UNC5CLQ8IV45 518 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 EAF2Q96CJ1 260 aaPredicted RBP6.78□□□□□ -1.32
NEK3-211ENST00000629912 BCL11AQ9H165 835 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 GPR108Q9NPR9 543 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
NEK3-211ENST00000629912 NRAPQ86VF7 1730 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 NWD2Q9ULI1 1742 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 HIP1O00291 1037 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 SGSM2O43147 1006 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 CYP19A1P11511 503 aaPredicted RBP6.77□□□□□ -1.33
NEK3-211ENST00000629912 MCCP23508 829 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 MCM2P49736 904 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 UBE3BQ7Z3V4 1068 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 AACSQ86V21 672 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 DNAJC10Q8IXB1 793 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 RUFY2Q8WXA3 655 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 EVI5LQ96CN4 794 aa6.77□□□□□ -1.33
NEK3-211ENST00000629912 RBM42Q9BTD8 480 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms